FFCP PHASE1:Hg19::chr5:135880880..135880889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135880880..135880889,- | |||
|description=CAGE_peak_at_chr5:135880880..135880889,- | |description=CAGE_peak_at_chr5:135880880..135880889,- | ||
|id=chr5:135880880..135880889,- | |id=chr5:135880880..135880889,- | ||
|ontology_enrichment_celltype=CL:0002322!1.21e-16!5;CL:1000415!4.52e-11!2;CL:0002178!5.54e-08!3 | |ontology_enrichment_celltype=CL:0002322!1.21e-16!5;CL:1000415!4.52e-11!2;CL:0002178!5.54e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.03e-17;3!CL:0002251;6.30e-11;20 | |ontology_enrichment_celltype_v019=CL:0002178;1.03e-17;3!CL:0002251;6.30e-11;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.12e-17,3;CL:0002251,6.30e-11,20 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3493!1.64e-40!2;DOID:305!5.60e-09!106;DOID:299!8.41e-08!25 | |ontology_enrichment_disease=DOID:3493!1.64e-40!2;DOID:305!5.60e-09!106;DOID:299!8.41e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;8.10e-26;2!DOID:5409;9.39e-14;4!DOID:1325;1.96e-08;7!DOID:3904;1.96e-08;7!DOID:3905;7.69e-07;9 | |ontology_enrichment_disease_v019=DOID:3493;8.10e-26;2!DOID:5409;9.39e-14;4!DOID:1325;1.96e-08;7!DOID:3904;1.96e-08;7!DOID:3905;7.69e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,9.18e-26,2;DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:305,2.62e-08,106;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002110!8.29e-08!3;UBERON:0006242!8.29e-08!3 | |ontology_enrichment_uberon=UBERON:0002110!8.29e-08!3;UBERON:0006242!8.29e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.21e-13;4!UBERON:0004785;1.21e-13;4!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0000974;1.50e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0003343;1.21e-13;4!UBERON:0004785;1.21e-13;4!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0000974;1.50e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.13e-13,4;UBERON:0004785,1.13e-13,4;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
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|short_description=p@chr5:135880880..135880889,- | |short_description=p@chr5:135880880..135880889,- | ||
}} | }} |
Latest revision as of 10:05, 30 July 2015
Short description: | p@chr5:135880880..135880889, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:135880880..135880889, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.12e-17 | 3 |
epithelial cell of alimentary canal | 6.30e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.13e-13 | 4 |
respiratory system mucosa | 1.13e-13 | 4 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.18e-26 | 2 |
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 7.48e-07 | 9 |