FFCP PHASE1:Hg19::chr21:46707793..46707815,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:46707793..46707815,-
|short_description=p1@POFUT2
|description=CAGE_peak_1_at_POFUT2_5end
|association_with_transcript=0bp_to_ENST00000331343,ENST00000334...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23275 | |EntrezGene=23275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14683 | |HGNC=14683 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G5 | |UniProt=Q9Y2G5 | ||
|association_with_transcript=0bp_to_ENST00000331343,ENST00000334538,ENST00000349485,ENST00000468360,ENST00000476653,ENST00000493524,ENST00000493811,NM_015227,NM_133635,NR_004858,uc002zhb.2,uc002zhc.2,uc002zhd.2,uc011afp.1,uc011afq.1_5end | |||
|cluster_id=chr21:46707793..46707815,- | |||
|coexpression_cluster_id=C2181 | |||
|description=CAGE_peak_1_at_POFUT2_5end | |||
|id=chr21:46707793..46707815,- | |||
|ontology_enrichment_celltype=CL:0000055!8.59e-29!180;CL:0000192!1.30e-17!42;CL:0000514!1.30e-17!42;CL:0000183!1.48e-17!59;CL:0000680!3.20e-16!57;CL:0000056!3.20e-16!57;CL:0000355!3.20e-16!57;CL:0000187!9.23e-16!54;CL:0000222!3.33e-15!119;CL:0000057!5.64e-15!75;CL:0000359!5.72e-14!32;CL:0000393!1.95e-13!60;CL:0000211!1.95e-13!60;CL:0000144!7.86e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.30e-13;32!CL:0000192;3.58e-12;43!CL:0000187;3.13e-08;55!CL:0000134;6.46e-08;55!CL:0000048;7.85e-07;58!CL:0000057;9.88e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.94e-17,43;CL:0000514,2.94e-17,43;CL:0000680,5.51e-16,58;CL:0000056,5.51e-16,58;CL:0000355,5.51e-16,58;CL:0000187,1.61e-15,55;CL:0000057,1.63e-15,76;CL:0000222,2.79e-15,121;CL:0000359,5.72e-14,32;CL:0000393,2.96e-13,61;CL:0000211,2.96e-13,61 | |||
|ontology_enrichment_development_v019=CL:0000514;3.58e-12;43!CL:0000355;2.23e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!7.23e-17!143;UBERON:0000486!2.05e-15!82;UBERON:0002049!2.22e-15!79;UBERON:0007798!2.22e-15!79;UBERON:0000914!2.68e-15!83;UBERON:0002329!2.68e-15!83;UBERON:0003077!2.68e-15!83;UBERON:0003059!2.68e-15!83;UBERON:0007282!2.68e-15!83;UBERON:0009618!2.68e-15!83;UBERON:0007285!2.68e-15!83;UBERON:0001134!4.68e-15!61;UBERON:0002036!4.68e-15!61;UBERON:0003082!4.68e-15!61;UBERON:0004290!5.46e-15!70;UBERON:0002385!1.20e-14!63;UBERON:0001015!1.20e-14!63;UBERON:0000383!1.20e-14!63;UBERON:0000055!5.91e-14!69;UBERON:0001637!1.42e-13!42;UBERON:0003509!1.42e-13!42;UBERON:0004572!1.42e-13!42;UBERON:0003914!1.57e-13!118;UBERON:0004872!1.87e-13!84;UBERON:0001981!8.41e-13!60;UBERON:0007500!8.41e-13!60;UBERON:0004537!8.41e-13!60;UBERON:0006965!8.41e-13!60;UBERON:0002100!5.27e-12!216;UBERON:0004535!5.99e-12!110;UBERON:0001009!2.63e-11!113;UBERON:0004573!3.23e-11!33;UBERON:0004571!3.23e-11!33;UBERON:0000490!4.05e-11!138;UBERON:0000475!1.47e-08!365;UBERON:0000119!1.54e-08!312;UBERON:0000483!2.31e-08!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.19e-10;42!UBERON:0003509;3.19e-10;42!UBERON:0004572;3.19e-10;42!UBERON:0004573;3.47e-10;33!UBERON:0004571;3.47e-10;33!UBERON:0007500;7.12e-07;56!UBERON:0001981;7.12e-07;56!UBERON:0004537;7.12e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.96e-18,160;UBERON:0009142,5.96e-18,160;UBERON:0007503,7.25e-17,78;UBERON:0005256,8.00e-16,122;UBERON:0000486,2.91e-15,83;UBERON:0001134,7.46e-15,62;UBERON:0002036,7.46e-15,62;UBERON:0003082,7.46e-15,62;UBERON:0002049,7.58e-15,78;UBERON:0007798,7.58e-15,78;UBERON:0002329,8.16e-15,71;UBERON:0003059,8.16e-15,71;UBERON:0007282,8.16e-15,71;UBERON:0004290,8.16e-15,71;UBERON:0009618,8.16e-15,71;UBERON:0007524,9.68e-15,73;UBERON:0002385,1.86e-14,64;UBERON:0001015,1.86e-14,64;UBERON:0000383,1.86e-14,64;UBERON:0003077,3.10e-14,72;UBERON:0007285,3.10e-14,72;UBERON:0003914,1.28e-13,117;UBERON:0001637,1.42e-13,42;UBERON:0003509,1.42e-13,42;UBERON:0004572,1.42e-13,42;UBERON:0000055,2.01e-13,68;UBERON:0004872,5.87e-13,83;UBERON:0007500,2.88e-12,59;UBERON:0001981,2.88e-12,59;UBERON:0004537,2.88e-12,59;UBERON:0006965,2.88e-12,59;UBERON:0000490,1.50e-11,148;UBERON:0004535,1.63e-11,109;UBERON:0002100,3.23e-11,199;UBERON:0004573,3.23e-11,33;UBERON:0004571,3.23e-11,33;UBERON:0001009,6.95e-11,112;UBERON:0000119,1.96e-08,309;UBERON:0000483,2.93e-08,306 | |||
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| ||
|short_description=p1@POFUT2 | |||
}} | }} |
Latest revision as of 20:43, 18 September 2015
Short description: | p1@POFUT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POFUT2_5end |
Coexpression cluster: | C2181_Smooth_Fibroblast_leiomyoma_mesenchymal_hepatic_normal_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000331343, ENST00000334538, ENST00000349485, ENST00000468360, ENST00000476653, ENST00000493524, ENST00000493811, NM_015227, NM_133635, NR_004858, uc002zhb.2, uc002zhc.2, uc002zhd.2, uc011afp.1, uc011afq.1_5end |
EntrezGene: | POFUT2 |
HGNC: | 14683 |
UniProt: | Q9Y2G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.94e-17 | 43 |
smooth muscle myoblast | 2.94e-17 | 43 |
muscle precursor cell | 5.51e-16 | 58 |
myoblast | 5.51e-16 | 58 |
multi-potent skeletal muscle stem cell | 5.51e-16 | 58 |
muscle cell | 1.61e-15 | 55 |
fibroblast | 1.63e-15 | 76 |
mesodermal cell | 2.79e-15 | 121 |
vascular associated smooth muscle cell | 5.72e-14 | 32 |
electrically responsive cell | 2.96e-13 | 61 |
electrically active cell | 2.96e-13 | 61 |