FFCP PHASE1:Hg19::chr12:71029851..71029867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:71029851..71029867,- | |||
|description=CAGE_peak_at_chr12:71029851..71029867,- | |description=CAGE_peak_at_chr12:71029851..71029867,- | ||
|id=chr12:71029851..71029867,- | |id=chr12:71029851..71029867,- | ||
|ontology_enrichment_celltype=CL:0000115!2.43e-10!35;CL:0002139!1.44e-09!24;CL:0005020!2.04e-08!6;CL:0002138!2.04e-08!6;CL:0005022!2.04e-08!6;CL:0002078!6.66e-08!44 | |ontology_enrichment_celltype=CL:0000115!2.43e-10!35;CL:0002139!1.44e-09!24;CL:0005020!2.04e-08!6;CL:0002138!2.04e-08!6;CL:0005022!2.04e-08!6;CL:0002078!6.66e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002138;8.62e-20;6!CL:0002188;5.86e-07;5!CL:0000115;6.10e-07;36 | |ontology_enrichment_celltype_v019=CL:0002138;8.62e-20;6!CL:0002188;5.86e-07;5!CL:0000115;6.10e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,8.63e-20,6;CL:0002138,8.63e-20,6;CL:0005022,8.63e-20,6;CL:0000115,9.37e-08,36;CL:0002188,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;8.62e-20;6 | |ontology_enrichment_development_v019=CL:0005022;8.62e-20;6 | ||
|ontology_enrichment_disease=DOID:3371!9.91e-07!1;DOID:4549!9.91e-07!1;DOID:5861!9.91e-07!1;DOID:6496!9.91e-07!1 | |ontology_enrichment_disease=DOID:3371!9.91e-07!1;DOID:4549!9.91e-07!1;DOID:5861!9.91e-07!1;DOID:6496!9.91e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;7.47e-30;1!DOID:4549;7.47e-30;1!DOID:5861;7.47e-30;1!DOID:6496;7.47e-30;1 | |ontology_enrichment_disease_v019=DOID:3371;7.47e-30;1!DOID:4549;7.47e-30;1!DOID:5861;7.47e-30;1!DOID:6496;7.47e-30;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-17!115;UBERON:0000477!2.84e-08!286;UBERON:0004111!3.87e-08!241;UBERON:0002106!9.03e-08!3;UBERON:0004854!9.03e-08!3;UBERON:0009034!9.03e-08!3;UBERON:0002095!9.03e-08!3;UBERON:0004782!9.03e-08!3;UBERON:0003281!9.03e-08!3;UBERON:0009664!9.03e-08!3;UBERON:0002296!9.03e-08!3;UBERON:0005602!9.03e-08!3;UBERON:0001179!9.03e-08!3;UBERON:0006293!9.03e-08!3;UBERON:0003978!1.03e-07!3;UBERON:0009751!1.03e-07!3;UBERON:0000946!1.03e-07!3;UBERON:0002523!1.03e-07!3;UBERON:0005983!1.03e-07!3;UBERON:0002165!1.03e-07!3;UBERON:0002062!1.03e-07!3;UBERON:0007280!1.03e-07!3;UBERON:0000055!8.42e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!4.62e-17!115;UBERON:0000477!2.84e-08!286;UBERON:0004111!3.87e-08!241;UBERON:0002106!9.03e-08!3;UBERON:0004854!9.03e-08!3;UBERON:0009034!9.03e-08!3;UBERON:0002095!9.03e-08!3;UBERON:0004782!9.03e-08!3;UBERON:0003281!9.03e-08!3;UBERON:0009664!9.03e-08!3;UBERON:0002296!9.03e-08!3;UBERON:0005602!9.03e-08!3;UBERON:0001179!9.03e-08!3;UBERON:0006293!9.03e-08!3;UBERON:0003978!1.03e-07!3;UBERON:0009751!1.03e-07!3;UBERON:0000946!1.03e-07!3;UBERON:0002523!1.03e-07!3;UBERON:0005983!1.03e-07!3;UBERON:0002165!1.03e-07!3;UBERON:0002062!1.03e-07!3;UBERON:0007280!1.03e-07!3;UBERON:0000055!8.42e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.05e-29;1!UBERON:0006518;2.05e-29;1!UBERON:0008949;2.05e-29;1!UBERON:0000101;2.05e-29;1!UBERON:0002167;2.05e-29;1!UBERON:0001473;4.07e-15;8!UBERON:0004536;4.07e-15;8!UBERON:0006558;4.07e-15;8!UBERON:0002465;2.66e-12;10!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3!UBERON:0002106;9.43e-11;3!UBERON:0002405;3.87e-10;27!UBERON:0004177;5.86e-07;5!UBERON:0005057;5.86e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002171;2.05e-29;1!UBERON:0006518;2.05e-29;1!UBERON:0008949;2.05e-29;1!UBERON:0000101;2.05e-29;1!UBERON:0002167;2.05e-29;1!UBERON:0001473;4.07e-15;8!UBERON:0004536;4.07e-15;8!UBERON:0006558;4.07e-15;8!UBERON:0002465;2.66e-12;10!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3!UBERON:0002106;9.43e-11;3!UBERON:0002405;3.87e-10;27!UBERON:0004177;5.86e-07;5!UBERON:0005057;5.86e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.33e-29,1;UBERON:0006518,1.33e-29,1;UBERON:0008949,1.33e-29,1;UBERON:0000101,1.33e-29,1;UBERON:0002167,1.33e-29,1;UBERON:0001473,4.07e-15,8;UBERON:0004536,4.07e-15,8;UBERON:0006558,4.07e-15,8;UBERON:0002465,2.66e-12,10;UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0002106,9.90e-11,3;UBERON:0004854,9.90e-11,3;UBERON:0009034,9.90e-11,3;UBERON:0002095,9.90e-11,3;UBERON:0004782,9.90e-11,3;UBERON:0003281,9.90e-11,3;UBERON:0009664,9.90e-11,3;UBERON:0002296,9.90e-11,3;UBERON:0005602,9.90e-11,3;UBERON:0001179,9.90e-11,3;UBERON:0006293,9.90e-11,3;UBERON:0003887,2.24e-10,12 | |||
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|short_description=p@chr12:71029851..71029867,- | |short_description=p@chr12:71029851..71029867,- | ||
}} | }} |
Latest revision as of 12:08, 24 July 2015
Short description: | p@chr12:71029851..71029867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:71029851..71029867, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 8.63e-20 | 6 |
endothelial cell of lymphatic vessel | 8.63e-20 | 6 |
vascular lymphangioblast | 8.63e-20 | 6 |
endothelial cell | 9.37e-08 | 36 |
glomerular endothelial cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.33e-29 | 1 |
right lung lobe | 1.33e-29 | 1 |
lower lobe of lung | 1.33e-29 | 1 |
lobe of lung | 1.33e-29 | 1 |
right lung | 1.33e-29 | 1 |
lymphatic vessel | 4.07e-15 | 8 |
lymph vasculature | 4.07e-15 | 8 |
lymphatic part of lymphoid system | 4.07e-15 | 8 |
lymphoid system | 2.66e-12 | 10 |
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
spleen | 9.90e-11 | 3 |
gastrointestinal system mesentery | 9.90e-11 | 3 |
stomach region | 9.90e-11 | 3 |
mesentery | 9.90e-11 | 3 |
gastrointestinal system serosa | 9.90e-11 | 3 |
mesentery of stomach | 9.90e-11 | 3 |
gut mesentery | 9.90e-11 | 3 |
dorsal mesentery | 9.90e-11 | 3 |
dorsal mesogastrium | 9.90e-11 | 3 |
peritoneal cavity | 9.90e-11 | 3 |
spleen primordium | 9.90e-11 | 3 |
intraembryonic coelom | 2.24e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |