FFCP PHASE1:Hg19::chr16:30081719..30081734,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-187bp_to_CU680643_5end | |association_with_transcript=-187bp_to_CU680643_5end | ||
|cluster_id=chr16:30081719..30081734,- | |||
|description=CAGE_peak_4_at_CU680643_5end | |description=CAGE_peak_4_at_CU680643_5end | ||
|id=chr16:30081719..30081734,- | |id=chr16:30081719..30081734,- | ||
|ontology_enrichment_celltype=CL:0000393!2.29e-13!60;CL:0000211!2.29e-13!60;CL:0000680!5.69e-12!57;CL:0000056!5.69e-12!57;CL:0000355!5.69e-12!57;CL:0000187!9.00e-12!54;CL:0000183!3.66e-10!59;CL:0000192!4.24e-10!42;CL:0000514!4.24e-10!42;CL:0000359!1.85e-09!32;CL:0002371!7.12e-07!591 | |ontology_enrichment_celltype=CL:0000393!2.29e-13!60;CL:0000211!2.29e-13!60;CL:0000680!5.69e-12!57;CL:0000056!5.69e-12!57;CL:0000355!5.69e-12!57;CL:0000187!9.00e-12!54;CL:0000183!3.66e-10!59;CL:0000192!4.24e-10!42;CL:0000514!4.24e-10!42;CL:0000359!1.85e-09!32;CL:0002371!7.12e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.28e-33;32!CL:0002594;1.13e-21;4!CL:0000192;6.50e-18;43!CL:0002592;1.75e-17;3!CL:0002596;2.90e-11;2!CL:0002595;4.90e-10;5!CL:0002202;5.05e-10;9!CL:0002632;5.05e-10;9!CL:0000393;4.79e-09;61!CL:0000211;4.79e-09;61!CL:0002494;1.88e-08;16!CL:0002328;2.14e-08;3!CL:0000307;2.86e-08;3!CL:0000187;3.09e-08;55!CL:0002368;5.94e-07;13!CL:0002591;8.02e-07;1 | |ontology_enrichment_celltype_v019=CL:0000359;8.28e-33;32!CL:0002594;1.13e-21;4!CL:0000192;6.50e-18;43!CL:0002592;1.75e-17;3!CL:0002596;2.90e-11;2!CL:0002595;4.90e-10;5!CL:0002202;5.05e-10;9!CL:0002632;5.05e-10;9!CL:0000393;4.79e-09;61!CL:0000211;4.79e-09;61!CL:0002494;1.88e-08;16!CL:0002328;2.14e-08;3!CL:0000307;2.86e-08;3!CL:0000187;3.09e-08;55!CL:0002368;5.94e-07;13!CL:0002591;8.02e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.23e-34,32;CL:0000192,6.15e-25,43;CL:0000514,6.15e-25,43;CL:0002594,1.49e-21,4;CL:0000187,8.78e-19,55;CL:0000680,1.21e-17,58;CL:0000056,1.21e-17,58;CL:0000355,1.21e-17,58;CL:0002592,1.76e-17,3;CL:0000393,1.29e-16,61;CL:0000211,1.29e-16,61;CL:0002596,2.61e-11,2;CL:0002595,4.07e-10,5;CL:0002202,5.82e-10,9;CL:0002632,5.82e-10,9;CL:0000222,4.70e-09,121;CL:0002494,2.07e-08,16;CL:0002328,2.22e-08,3;CL:0000068,3.43e-08,3;CL:0000069,3.43e-08,3;CL:0000307,3.43e-08,3;CL:0000377,3.43e-08,3;CL:0002368,6.54e-07,13;CL:0002591,7.60e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;6.50e-18;43!CL:0000355;9.32e-10;58!CL:0000377;2.86e-08;3 | |ontology_enrichment_development_v019=CL:0000514;6.50e-18;43!CL:0000355;9.32e-10;58!CL:0000377;2.86e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.08e-13!83;UBERON:0002329!5.08e-13!83;UBERON:0003077!5.08e-13!83;UBERON:0003059!5.08e-13!83;UBERON:0007282!5.08e-13!83;UBERON:0009618!5.08e-13!83;UBERON:0007285!5.08e-13!83;UBERON:0004290!1.62e-12!70;UBERON:0001134!3.15e-12!61;UBERON:0002036!3.15e-12!61;UBERON:0003082!3.15e-12!61;UBERON:0002385!7.88e-12!63;UBERON:0001015!7.88e-12!63;UBERON:0000383!7.88e-12!63;UBERON:0002204!5.57e-11!167;UBERON:0000486!5.93e-11!82;UBERON:0001637!8.12e-09!42;UBERON:0003509!8.12e-09!42;UBERON:0004572!8.12e-09!42;UBERON:0005256!6.38e-07!143 | |ontology_enrichment_uberon=UBERON:0000914!5.08e-13!83;UBERON:0002329!5.08e-13!83;UBERON:0003077!5.08e-13!83;UBERON:0003059!5.08e-13!83;UBERON:0007282!5.08e-13!83;UBERON:0009618!5.08e-13!83;UBERON:0007285!5.08e-13!83;UBERON:0004290!1.62e-12!70;UBERON:0001134!3.15e-12!61;UBERON:0002036!3.15e-12!61;UBERON:0003082!3.15e-12!61;UBERON:0002385!7.88e-12!63;UBERON:0001015!7.88e-12!63;UBERON:0000383!7.88e-12!63;UBERON:0002204!5.57e-11!167;UBERON:0000486!5.93e-11!82;UBERON:0001637!8.12e-09!42;UBERON:0003509!8.12e-09!42;UBERON:0004572!8.12e-09!42;UBERON:0005256!6.38e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.13e-21;4!UBERON:0003498;1.75e-17;3!UBERON:0005985;1.75e-17;3!UBERON:0001621;1.75e-17;3!UBERON:0001637;2.27e-16;42!UBERON:0003509;2.27e-16;42!UBERON:0004572;2.27e-16;42!UBERON:0004573;5.85e-12;33!UBERON:0004571;5.85e-12;33!UBERON:0005396;2.90e-11;2!UBERON:0003834;4.90e-10;5!UBERON:0001533;4.90e-10;5!UBERON:0010260;1.03e-09;9!UBERON:0007500;1.18e-09;56!UBERON:0001981;1.18e-09;56!UBERON:0004537;1.18e-09;56!UBERON:0004815;2.14e-08;3!UBERON:0002031;2.14e-08;3!UBERON:0003914;5.12e-08;74!UBERON:0002049;2.28e-07;75!UBERON:0007798;2.28e-07;75!UBERON:0003513;2.70e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001310;1.13e-21;4!UBERON:0003498;1.75e-17;3!UBERON:0005985;1.75e-17;3!UBERON:0001621;1.75e-17;3!UBERON:0001637;2.27e-16;42!UBERON:0003509;2.27e-16;42!UBERON:0004572;2.27e-16;42!UBERON:0004573;5.85e-12;33!UBERON:0004571;5.85e-12;33!UBERON:0005396;2.90e-11;2!UBERON:0003834;4.90e-10;5!UBERON:0001533;4.90e-10;5!UBERON:0010260;1.03e-09;9!UBERON:0007500;1.18e-09;56!UBERON:0001981;1.18e-09;56!UBERON:0004537;1.18e-09;56!UBERON:0004815;2.14e-08;3!UBERON:0002031;2.14e-08;3!UBERON:0003914;5.12e-08;74!UBERON:0002049;2.28e-07;75!UBERON:0007798;2.28e-07;75!UBERON:0003513;2.70e-07;7 | ||
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| ||
|short_description=p4@CU680643 | |short_description=p4@CU680643 | ||
}} | }} |
Latest revision as of 08:04, 25 July 2015
Short description: | p4@CU680643 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU680643_5end |
Coexpression cluster: | NA |
Association with transcript: | -187bp_to_CU680643_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.23e-34 | 32 |
smooth muscle cell | 6.15e-25 | 43 |
smooth muscle myoblast | 6.15e-25 | 43 |
smooth muscle cell of the umbilical artery | 1.49e-21 | 4 |
muscle cell | 8.78e-19 | 55 |
muscle precursor cell | 1.21e-17 | 58 |
myoblast | 1.21e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-17 | 58 |
smooth muscle cell of the coronary artery | 1.76e-17 | 3 |
electrically responsive cell | 1.29e-16 | 61 |
electrically active cell | 1.29e-16 | 61 |
smooth muscle cell of the carotid artery | 2.61e-11 | 2 |
smooth muscle cell of the subclavian artery | 4.07e-10 | 5 |
epithelial cell of tracheobronchial tree | 5.82e-10 | 9 |
epithelial cell of lower respiratory tract | 5.82e-10 | 9 |
mesodermal cell | 4.70e-09 | 121 |
cardiocyte | 2.07e-08 | 16 |
bronchial epithelial cell | 2.22e-08 | 3 |
duct epithelial cell | 3.43e-08 | 3 |
branched duct epithelial cell | 3.43e-08 | 3 |
tracheal epithelial cell | 3.43e-08 | 3 |
tracheoblast | 3.43e-08 | 3 |
respiratory epithelial cell | 6.54e-07 | 13 |
smooth muscle cell of the pulmonary artery | 7.60e-07 | 1 |