FFCP PHASE1:Hg19::chr17:76850062..76850090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76850062..76850090,- | |||
|coexpression_cluster_id=C706 | |coexpression_cluster_id=C706 | ||
|description=CAGE_peak_at_chr17:76850062..76850090,- | |description=CAGE_peak_at_chr17:76850062..76850090,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.80e-22!180;CL:0000057!4.29e-16!75;CL:0000222!8.89e-09!119;CL:0000499!9.64e-08!27;CL:0002334!2.81e-07!12;CL:0000183!5.28e-07!59;CL:0000192!8.79e-07!42;CL:0000514!8.79e-07!42 | |ontology_enrichment_celltype=CL:0000055!2.80e-22!180;CL:0000057!4.29e-16!75;CL:0000222!8.89e-09!119;CL:0000499!9.64e-08!27;CL:0002334!2.81e-07!12;CL:0000183!5.28e-07!59;CL:0000192!8.79e-07!42;CL:0000514!8.79e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000499;1.09e-08;28!CL:0002334;1.12e-08;12!CL:0000134;1.48e-08;55!CL:0000048;7.17e-08;58!CL:0002620;1.29e-07;23!CL:0000723;3.16e-07;61!CL:0002320;5.84e-07;188 | |ontology_enrichment_celltype_v019=CL:0000499;1.09e-08;28!CL:0002334;1.12e-08;12!CL:0000134;1.48e-08;55!CL:0000048;7.17e-08;58!CL:0002620;1.29e-07;23!CL:0000723;3.16e-07;61!CL:0002320;5.84e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.14e-17,76;CL:0000048,1.28e-10,427;CL:0000723,9.73e-10,433;CL:0000034,1.23e-08,441;CL:0002334,1.32e-08,12;CL:0000499,1.68e-08,28;CL:0002620,1.46e-07,23;CL:0002320,5.05e-07,361;CL:0000192,6.09e-07,43;CL:0000514,6.09e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.82e-11!659;UBERON:0000467!5.07e-09!625;UBERON:0000480!6.31e-09!626 | |ontology_enrichment_uberon=UBERON:0000468!2.82e-11!659;UBERON:0000467!5.07e-09!625;UBERON:0000480!6.31e-09!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.59e-07;198!UBERON:0004457;7.68e-07;9!UBERON:0000042;7.68e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002384;2.59e-07;198!UBERON:0004457;7.68e-07;9!UBERON:0000042;7.68e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.09e-08,315;UBERON:0004120,2.09e-08,315;UBERON:0006603,2.09e-08,315;UBERON:0002199,4.41e-08,46;UBERON:0002416,4.41e-08,46;UBERON:0002097,4.37e-07,41;UBERON:0007503,6.02e-07,78 | |||
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| ||
|short_description=p@chr17:76850062..76850090,- | |short_description=p@chr17:76850062..76850090,- | ||
}} | }} |
Latest revision as of 22:07, 25 July 2015
Short description: | p@chr17:76850062..76850090, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76850062..76850090, - |
Coexpression cluster: | C706_Adipocyte_Preadipocyte_tenocyte_leiomyoma_chorionic_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.14e-17 | 76 |
multi fate stem cell | 1.28e-10 | 427 |
somatic stem cell | 9.73e-10 | 433 |
stem cell | 1.23e-08 | 441 |
preadipocyte | 1.32e-08 | 12 |
stromal cell | 1.68e-08 | 28 |
skin fibroblast | 1.46e-07 | 23 |
connective tissue cell | 5.05e-07 | 361 |
smooth muscle cell | 6.09e-07 | 43 |
smooth muscle myoblast | 6.09e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.09e-08 | 315 |
mesoderm-derived structure | 2.09e-08 | 315 |
presumptive mesoderm | 2.09e-08 | 315 |
integument | 4.41e-08 | 46 |
integumental system | 4.41e-08 | 46 |
skin of body | 4.37e-07 | 41 |
epithelial vesicle | 6.02e-07 | 78 |