FFCP PHASE1:Hg19::chr10:17496614..17496625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338596 | |EntrezGene=338596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23317 | |HGNC=23317 | ||
|TSSclassifier=strong | |||
|UniProt=B0YJ96 | |UniProt=B0YJ96 | ||
|association_with_transcript=-228bp_to_ENST00000377610_5end | |association_with_transcript=-228bp_to_ENST00000377610_5end | ||
|cluster_id=chr10:17496614..17496625,- | |||
|coexpression_cluster_id=C3002 | |coexpression_cluster_id=C3002 | ||
|description=CAGE_peak_5_at_ST8SIA6_5end | |description=CAGE_peak_5_at_ST8SIA6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000988!3.76e-08!182;CL:0000037!1.87e-07!172;CL:0000566!1.87e-07!172;CL:0002032!9.74e-07!165;CL:0000837!9.74e-07!165 | |ontology_enrichment_celltype=CL:0000988!3.76e-08!182;CL:0000037!1.87e-07!172;CL:0000566!1.87e-07!172;CL:0002032!9.74e-07!165;CL:0000837!9.74e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.56e-21;5!CL:0000148;1.03e-14;10!CL:0000163;1.29e-11;9!CL:0000147;1.86e-10;14!CL:0000037;2.82e-07;1!CL:0001024;2.82e-07;1!CL:0002566;2.82e-07;1!CL:0000710;2.96e-07;20 | |ontology_enrichment_celltype_v019=CL:0000097;8.56e-21;5!CL:0000148;1.03e-14;10!CL:0000163;1.29e-11;9!CL:0000147;1.86e-10;14!CL:0000037;2.82e-07;1!CL:0001024;2.82e-07;1!CL:0002566;2.82e-07;1!CL:0000710;2.96e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.99e-21,5;CL:0002028,9.99e-21,5;CL:0000148,1.27e-14,10;CL:0000541,1.27e-14,10;CL:0000163,1.40e-11,9;CL:0000147,2.15e-10,14;CL:0000988,1.20e-09,177;CL:0000763,3.55e-08,108;CL:0000049,3.55e-08,108;CL:0002566,2.66e-07,1;CL:0000710,3.26e-07,20;CL:0001024,3.62e-07,1;CL:0000037,6.32e-07,168 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!5.47e-14!31;DOID:1240!1.37e-12!39;DOID:2531!2.73e-09!51;DOID:0060083!2.73e-09!51;DOID:1036!5.55e-07!8 | |ontology_enrichment_disease=DOID:8692!5.47e-14!31;DOID:1240!1.37e-12!39;DOID:2531!2.73e-09!51;DOID:0060083!2.73e-09!51;DOID:1036!5.55e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.57e-14;31!DOID:1240;3.50e-11;39!DOID:2531;3.79e-10;51!DOID:0060083;3.79e-10;51!DOID:0060060;1.14e-07;1!DOID:0060061;1.14e-07;1!DOID:8691;1.14e-07;1!DOID:8552;1.14e-07;1!DOID:3371;2.82e-07;1!DOID:4549;2.82e-07;1!DOID:5861;2.82e-07;1!DOID:6496;2.82e-07;1!DOID:9119;2.82e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;2.57e-14;31!DOID:1240;3.50e-11;39!DOID:2531;3.79e-10;51!DOID:0060083;3.79e-10;51!DOID:0060060;1.14e-07;1!DOID:0060061;1.14e-07;1!DOID:8691;1.14e-07;1!DOID:8552;1.14e-07;1!DOID:3371;2.82e-07;1!DOID:4549;2.82e-07;1!DOID:5861;2.82e-07;1!DOID:6496;2.82e-07;1!DOID:9119;2.82e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.28e-14,31;DOID:1240,9.32e-14,39;DOID:2531,2.34e-12,51;DOID:0060083,2.34e-12,51;DOID:0060060,1.18e-07,1;DOID:0060061,1.18e-07,1;DOID:8691,1.18e-07,1;DOID:8552,1.25e-07,1;DOID:3371,1.61e-07,1;DOID:4549,1.61e-07,1;DOID:5861,1.61e-07,1;DOID:6496,1.61e-07,1;DOID:9119,2.50e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-15!115;UBERON:0002616!4.43e-07!59;UBERON:0000178!7.97e-07!15;UBERON:0000179!7.97e-07!15;UBERON:0000463!7.97e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!3.58e-15!115;UBERON:0002616!4.43e-07!59;UBERON:0000178!7.97e-07!15;UBERON:0000179!7.97e-07!15;UBERON:0000463!7.97e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.82e-07;1!UBERON:0006518;2.82e-07;1!UBERON:0008949;2.82e-07;1!UBERON:0000101;2.82e-07;1!UBERON:0002167;2.82e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002171;2.82e-07;1!UBERON:0006518;2.82e-07;1!UBERON:0008949;2.82e-07;1!UBERON:0000101;2.82e-07;1!UBERON:0002167;2.82e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.83e-07,1;UBERON:0006518,2.83e-07,1;UBERON:0008949,2.83e-07,1;UBERON:0000101,2.83e-07,1;UBERON:0002167,2.83e-07,1 | |||
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| ||
|short_description=p5@ST8SIA6 | |short_description=p5@ST8SIA6 | ||
}} | }} |
Latest revision as of 11:19, 17 September 2015
Short description: | p5@ST8SIA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ST8SIA6_5end |
Coexpression cluster: | C3002_Mast_CD34_acute_CD4_Melanocyte_chronic_CD133 |
Association with transcript: | -228bp_to_ENST00000377610_5end |
EntrezGene: | ST8SIA6 |
HGNC: | 23317 |
UniProt: | B0YJ96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.99e-21 | 5 |
basophil mast progenitor cell | 9.99e-21 | 5 |
melanocyte | 1.27e-14 | 10 |
melanoblast | 1.27e-14 | 10 |
endocrine cell | 1.40e-11 | 9 |
pigment cell | 2.15e-10 | 14 |
hematopoietic cell | 1.20e-09 | 177 |
myeloid cell | 3.55e-08 | 108 |
common myeloid progenitor | 3.55e-08 | 108 |
dark melanocyte | 2.66e-07 | 1 |
neurecto-epithelial cell | 3.26e-07 | 20 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.62e-07 | 1 |
hematopoietic stem cell | 6.32e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.83e-07 | 1 |
right lung lobe | 2.83e-07 | 1 |
lower lobe of lung | 2.83e-07 | 1 |
lobe of lung | 2.83e-07 | 1 |
right lung | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.28e-14 | 31 |
leukemia | 9.32e-14 | 39 |
hematologic cancer | 2.34e-12 | 51 |
immune system cancer | 2.34e-12 | 51 |
non-Hodgkin lymphoma | 1.18e-07 | 1 |
cutaneous T cell lymphoma | 1.18e-07 | 1 |
mycosis fungoides | 1.18e-07 | 1 |
chronic myeloid leukemia | 1.25e-07 | 1 |
chondrosarcoma | 1.61e-07 | 1 |
extraosseous chondrosarcoma | 1.61e-07 | 1 |
myxoid chondrosarcoma | 1.61e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.61e-07 | 1 |
acute myeloid leukemia | 2.50e-07 | 1 |