FFCP PHASE1:Hg19::chr17:29248896..29248906,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55803 | |EntrezGene=55803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16487 | |HGNC=16487 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPF8 | |UniProt=Q9NPF8 | ||
|association_with_transcript=142bp_to_NM_018404,uc002hfx.2,uc002hfy.2,uc010csk.2,uc010csl.2_5end | |association_with_transcript=142bp_to_NM_018404,uc002hfx.2,uc002hfy.2,uc010csk.2,uc010csl.2_5end | ||
|cluster_id=chr17:29248896..29248906,+ | |||
|coexpression_cluster_id=C294 | |coexpression_cluster_id=C294 | ||
|description=CAGE_peak_5_at_ADAP2_5end | |description=CAGE_peak_5_at_ADAP2_5end | ||
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|ontology_enrichment_celltype=CL:0002009!1.27e-27!65;CL:0002194!1.90e-27!63;CL:0000576!1.90e-27!63;CL:0000040!1.90e-27!63;CL:0000559!1.90e-27!63;CL:0000557!4.12e-24!71;CL:0000839!2.42e-23!70;CL:0000766!1.01e-21!76;CL:0002057!4.77e-20!42;CL:0000860!4.46e-18!45;CL:0000763!5.51e-16!112;CL:0000049!5.51e-16!112;CL:0002087!1.31e-13!119;CL:0000738!3.13e-13!140;CL:0002393!5.29e-13!9;CL:0002397!5.29e-13!9;CL:0002031!4.59e-11!124;CL:0000037!2.43e-09!172;CL:0000566!2.43e-09!172;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0000988!1.42e-08!182;CL:0000990!7.95e-08!8 | |ontology_enrichment_celltype=CL:0002009!1.27e-27!65;CL:0002194!1.90e-27!63;CL:0000576!1.90e-27!63;CL:0000040!1.90e-27!63;CL:0000559!1.90e-27!63;CL:0000557!4.12e-24!71;CL:0000839!2.42e-23!70;CL:0000766!1.01e-21!76;CL:0002057!4.77e-20!42;CL:0000860!4.46e-18!45;CL:0000763!5.51e-16!112;CL:0000049!5.51e-16!112;CL:0002087!1.31e-13!119;CL:0000738!3.13e-13!140;CL:0002393!5.29e-13!9;CL:0002397!5.29e-13!9;CL:0002031!4.59e-11!124;CL:0000037!2.43e-09!172;CL:0000566!2.43e-09!172;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0000988!1.42e-08!182;CL:0000990!7.95e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.20e-49;6!CL:0002619;2.46e-25;3!CL:0000990;3.32e-14;8!CL:0002393;2.19e-12;6!CL:0002397;2.19e-12;6!CL:0000766;6.79e-12;69!CL:0000451;1.16e-11;10!CL:0000473;1.31e-08;39!CL:0000234;1.31e-08;39!CL:0000576;4.67e-08;48!CL:0000453;3.23e-07;5!CL:0000763;4.43e-07;100 | |ontology_enrichment_celltype_v019=CL:0000235;5.20e-49;6!CL:0002619;2.46e-25;3!CL:0000990;3.32e-14;8!CL:0002393;2.19e-12;6!CL:0002397;2.19e-12;6!CL:0000766;6.79e-12;69!CL:0000451;1.16e-11;10!CL:0000473;1.31e-08;39!CL:0000234;1.31e-08;39!CL:0000576;4.67e-08;48!CL:0000453;3.23e-07;5!CL:0000763;4.43e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.26e-49,6;CL:0002194,1.67e-31,59;CL:0000576,1.67e-31,59;CL:0000040,1.67e-31,59;CL:0000559,1.67e-31,59;CL:0002009,2.14e-30,61;CL:0000839,6.44e-28,66;CL:0000557,1.82e-27,67;CL:0000766,2.17e-25,72;CL:0002619,2.80e-25,3;CL:0000763,2.60e-23,108;CL:0000049,2.60e-23,108;CL:0000473,1.75e-18,48;CL:0000234,1.75e-18,48;CL:0000738,8.54e-16,136;CL:0002087,6.53e-15,115;CL:0002032,1.37e-14,161;CL:0000837,1.37e-14,161;CL:0002393,3.32e-14,9;CL:0002397,3.32e-14,9;CL:0002031,3.56e-14,120;CL:0000990,3.56e-14,8;CL:0000037,7.62e-14,168;CL:0000988,5.67e-13,177;CL:0000451,1.23e-11,10;CL:0000453,3.79e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000049;2.06e-07;108 | |ontology_enrichment_development_v019=CL:0000049;2.06e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-22!102;UBERON:0003061!1.06e-22!102;UBERON:0007023!1.07e-22!115;UBERON:0002193!3.21e-22!112;UBERON:0002371!4.38e-21!80;UBERON:0001474!9.30e-20!86;UBERON:0002405!5.97e-18!115;UBERON:0004765!8.37e-15!101;UBERON:0001434!8.37e-15!101;UBERON:0000062!6.12e-13!511;UBERON:0001049!1.04e-09!57;UBERON:0005068!1.04e-09!57;UBERON:0006241!1.04e-09!57;UBERON:0007135!1.04e-09!57;UBERON:0000467!8.55e-08!625;UBERON:0000480!9.98e-08!626;UBERON:0000468!2.45e-07!659;UBERON:0000923!4.92e-07!604;UBERON:0005291!4.92e-07!604;UBERON:0006598!4.92e-07!604;UBERON:0002532!4.92e-07!604;UBERON:0003081!5.62e-07!216;UBERON:0002050!5.70e-07!605;UBERON:0005423!5.70e-07!605;UBERON:0003080!6.28e-07!42;UBERON:0000922!6.47e-07!612 | |ontology_enrichment_uberon=UBERON:0002390!1.06e-22!102;UBERON:0003061!1.06e-22!102;UBERON:0007023!1.07e-22!115;UBERON:0002193!3.21e-22!112;UBERON:0002371!4.38e-21!80;UBERON:0001474!9.30e-20!86;UBERON:0002405!5.97e-18!115;UBERON:0004765!8.37e-15!101;UBERON:0001434!8.37e-15!101;UBERON:0000062!6.12e-13!511;UBERON:0001049!1.04e-09!57;UBERON:0005068!1.04e-09!57;UBERON:0006241!1.04e-09!57;UBERON:0007135!1.04e-09!57;UBERON:0000467!8.55e-08!625;UBERON:0000480!9.98e-08!626;UBERON:0000468!2.45e-07!659;UBERON:0000923!4.92e-07!604;UBERON:0005291!4.92e-07!604;UBERON:0006598!4.92e-07!604;UBERON:0002532!4.92e-07!604;UBERON:0003081!5.62e-07!216;UBERON:0002050!5.70e-07!605;UBERON:0005423!5.70e-07!605;UBERON:0003080!6.28e-07!42;UBERON:0000922!6.47e-07!612 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.36e-24,76;UBERON:0001474,5.49e-22,82;UBERON:0002405,1.14e-21,93;UBERON:0002390,2.02e-20,98;UBERON:0003061,2.02e-20,98;UBERON:0004765,8.41e-20,90;UBERON:0002193,2.87e-18,108;UBERON:0001434,1.48e-17,100;UBERON:0002204,2.15e-09,167;UBERON:0003081,2.53e-08,203 | |||
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|short_description=p5@ADAP2 | |short_description=p5@ADAP2 | ||
}} | }} |
Latest revision as of 10:35, 19 September 2015
Short description: | p5@ADAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADAP2_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 142bp_to_NM_018404, uc002hfx.2, uc002hfy.2, uc010csk.2, uc010csl.2_5end |
EntrezGene: | ADAP2 |
HGNC: | 16487 |
UniProt: | Q9NPF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.26e-49 | 6 |
monopoietic cell | 1.67e-31 | 59 |
monocyte | 1.67e-31 | 59 |
monoblast | 1.67e-31 | 59 |
promonocyte | 1.67e-31 | 59 |
macrophage dendritic cell progenitor | 2.14e-30 | 61 |
myeloid lineage restricted progenitor cell | 6.44e-28 | 66 |
granulocyte monocyte progenitor cell | 1.82e-27 | 67 |
myeloid leukocyte | 2.17e-25 | 72 |
adult endothelial progenitor cell | 2.80e-25 | 3 |
myeloid cell | 2.60e-23 | 108 |
common myeloid progenitor | 2.60e-23 | 108 |
defensive cell | 1.75e-18 | 48 |
phagocyte | 1.75e-18 | 48 |
leukocyte | 8.54e-16 | 136 |
nongranular leukocyte | 6.53e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.37e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-14 | 161 |
intermediate monocyte | 3.32e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.32e-14 | 9 |
hematopoietic lineage restricted progenitor cell | 3.56e-14 | 120 |
conventional dendritic cell | 3.56e-14 | 8 |
hematopoietic stem cell | 7.62e-14 | 168 |
hematopoietic cell | 5.67e-13 | 177 |
dendritic cell | 1.23e-11 | 10 |
Langerhans cell | 3.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.36e-24 | 76 |
bone element | 5.49e-22 | 82 |
immune system | 1.14e-21 | 93 |
hematopoietic system | 2.02e-20 | 98 |
blood island | 2.02e-20 | 98 |
skeletal element | 8.41e-20 | 90 |
hemolymphoid system | 2.87e-18 | 108 |
skeletal system | 1.48e-17 | 100 |
musculoskeletal system | 2.15e-09 | 167 |
lateral plate mesoderm | 2.53e-08 | 203 |