FFCP PHASE1:Hg19::chr9:132222772..132222790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:132222772..132222790,+ | |||
|coexpression_cluster_id=C4802 | |coexpression_cluster_id=C4802 | ||
|description=CAGE_peak_at_chr9:132222772..132222790,+ | |description=CAGE_peak_at_chr9:132222772..132222790,+ | ||
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|ontology_enrichment_celltype=CL:0002057!9.00e-18!42;CL:0000860!3.76e-17!45;CL:0000766!1.10e-15!76;CL:0000557!8.12e-12!71;CL:0000738!6.58e-11!140;CL:0000839!7.83e-11!70;CL:0002194!7.81e-10!63;CL:0000576!7.81e-10!63;CL:0000040!7.81e-10!63;CL:0000559!7.81e-10!63;CL:0002009!7.96e-10!65;CL:0000763!2.72e-08!112;CL:0000049!2.72e-08!112;CL:0000988!1.64e-07!182;CL:0002031!1.77e-07!124;CL:0000037!4.00e-07!172;CL:0000566!4.00e-07!172;CL:0000094!8.25e-07!8 | |ontology_enrichment_celltype=CL:0002057!9.00e-18!42;CL:0000860!3.76e-17!45;CL:0000766!1.10e-15!76;CL:0000557!8.12e-12!71;CL:0000738!6.58e-11!140;CL:0000839!7.83e-11!70;CL:0002194!7.81e-10!63;CL:0000576!7.81e-10!63;CL:0000040!7.81e-10!63;CL:0000559!7.81e-10!63;CL:0002009!7.96e-10!65;CL:0000763!2.72e-08!112;CL:0000049!2.72e-08!112;CL:0000988!1.64e-07!182;CL:0002031!1.77e-07!124;CL:0000037!4.00e-07!172;CL:0000566!4.00e-07!172;CL:0000094!8.25e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-26;33!CL:0002057;1.14e-26;33!CL:0000473;1.67e-17;39!CL:0000234;1.67e-17;39!CL:0000576;5.30e-15;48!CL:0000766;2.75e-12;69!CL:0000094;2.13e-11;8!CL:0000081;4.53e-11;11 | |ontology_enrichment_celltype_v019=CL:0000860;1.14e-26;33!CL:0002057;1.14e-26;33!CL:0000473;1.67e-17;39!CL:0000234;1.67e-17;39!CL:0000576;5.30e-15;48!CL:0000766;2.75e-12;69!CL:0000094;2.13e-11;8!CL:0000081;4.53e-11;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.35e-26,72;CL:0000860,3.53e-26,42;CL:0002057,3.53e-26,42;CL:0000473,2.30e-21,48;CL:0000234,2.30e-21,48;CL:0000738,1.86e-19,136;CL:0000557,2.94e-18,67;CL:0000839,1.01e-17,66;CL:0002194,8.34e-17,59;CL:0000576,8.34e-17,59;CL:0000040,8.34e-17,59;CL:0000559,8.34e-17,59;CL:0002009,7.05e-16,61;CL:0000988,1.73e-14,177;CL:0000763,6.56e-14,108;CL:0000049,6.56e-14,108;CL:0000037,6.98e-14,168;CL:0002087,6.12e-13,115;CL:0002031,6.18e-13,120;CL:0002032,4.06e-12,161;CL:0000837,4.06e-12,161;CL:0000094,2.26e-11,8;CL:0000081,8.26e-11,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-19;42 | |ontology_enrichment_development_v019=CL:0002057;1.78e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-15!102;UBERON:0003061!1.12e-15!102;UBERON:0002193!6.70e-14!112;UBERON:0002371!4.66e-11!80;UBERON:0001474!6.37e-11!86;UBERON:0007023!4.50e-09!115;UBERON:0002405!4.95e-08!115;UBERON:0004765!7.41e-08!101;UBERON:0001434!7.41e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!1.12e-15!102;UBERON:0003061!1.12e-15!102;UBERON:0002193!6.70e-14!112;UBERON:0002371!4.66e-11!80;UBERON:0001474!6.37e-11!86;UBERON:0007023!4.50e-09!115;UBERON:0002405!4.95e-08!115;UBERON:0004765!7.41e-08!101;UBERON:0001434!7.41e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-08;15!UBERON:0000179;1.42e-08;15!UBERON:0000463;1.42e-08;15!UBERON:0002390;3.38e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-08;15!UBERON:0000179;1.42e-08;15!UBERON:0000463;1.42e-08;15!UBERON:0002390;3.38e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.19e-25,98;UBERON:0003061,2.19e-25,98;UBERON:0002193,2.77e-21,108;UBERON:0002371,4.01e-18,76;UBERON:0001474,1.27e-16,82;UBERON:0002405,6.13e-15,93;UBERON:0004765,9.66e-15,90;UBERON:0001434,6.43e-12,100;UBERON:0003081,1.71e-10,203;UBERON:0000178,1.72e-08,15;UBERON:0000179,1.72e-08,15;UBERON:0000463,1.72e-08,15;UBERON:0007023,5.32e-07,114 | |||
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|phase1_expression=0.908391896352783,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0.495065411840187,0.662794751455832,0,0,0,0.487932798790507,0.492484232307152,2.24400760368678,0.940364164434263,0.572471974262113,1.23186982565596,1.63205431473244,0.229240217243854,0.410502947249729,0.0787107813136792,3.14691421479123,4.22212337906934,5.57338043937874,0,0.30120591877825,0.369754010166788,0,0,1.46800219667424,2.76997704265939,1.60435557976113,1.95309783644267,0.223915474239924,0.32389366601898,0.257575567634187,4.50734540216651,5.29026321164333,6.0646015296954,3.71886459049095,4.93401465626191,10.8397229813286,3.45230870786581,2.0492856522328,8.0403958162119,3.44745680736619,5.16387746867061,10.8341189275473,3.01187743268168,5.45812300115692,6.74170453335254,4.89734227793444,2.24650318953266,7.67204550958849,0.659702600373432,1.39624560335142,4.26224750532694,1.45104619314292,1.13477044938228,4.35975574296902,4.77372463987812,5.21482918420201,9.33912032232002,0,1.47311054395026,4.74693581161327,0.633765858935825,0.850417199860174,1.46761051855863,1.12328631146495,0.450530678524519,1.92870704036496,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,3.98449078376614,0.587237189370939,3.05818582500183,2.64342657158052,0.560508562981536,1.05353633910031,1.7703879310245,1.57204305099666,2.05601498999509,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.883817722424512,0.221533894583621,0,0,0,0.164437904603676,0,0,0.444859689486181,0.535081656179426,0,0.113309342697566,3.06576394881537,2.06176467289578,1.77113784413652,0.637130828648193,0,0.950452044448374,0.301150238155546,0.383959833463255,0,0,0,6.04820229674197,5.34880391567015,2.75166367377318,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0,1.5905718941022,0,0.472674085820339,0.221729397462564,0.175669571386252,0.392937226493138,0,0.370784442784429,0,0.174129737299267,0,1.19245312152671,1.71598473234038,1.11437250398869,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0.760272105718513,0,0,0,0,0,0.112611480483322,3.06633274931766,0,0,13.1780417436063,19.3890132074163,0,0,0,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0.49333509683432,0,0.538842688278752,0,0.454072282934794,0.576175924479999,0.468642863667593,0,0,0,0.117434498643765,0,0.421352420106746,0.61246251376468,0.491337269247072,0.826606249406124,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0.612975591598039,0.45071417671979,0,0.179389635688862,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0.184099797284599,1.13152239773168,0.710019185033229,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0,0.348581828608555,0.932949495138334,0,1.09493207722749,0,1.92972281457866,0,0.464367928031979,0,0.946454400318751,0.674338760312407,0.723033089650446,0.55146986366197,1.08939722046203,0.474541238222193,0.404493924480493,0,0.769494313892781,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0.977424915930974,0,1.44331342025273,0.463721619900307,0.352226082707465,0.433099343283221,0.925971025153221,0.190254152234598,7.11183958163348,4.29243081047436,0,0,0.445893486866185,0,0.16798212819886,0,0,0,0.383382679165211,0.492663237895943,0.704387472105808,21.9767802473218,11.9619561336078,18.3051528468251,0.444485260045183,0.763976851116555,8.20522130470329,0,0.514137463516618,0,0.285826432630578,0.224262168690721,0.87192013766656,0.07333828582095,0,0,0,1.06375246633948,0,0,1.41849132023278,1.0656887160644,0,1.62786481617433,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,1.02738161275192,0.179060963239896,0.448340575974109,5.51686128565396,8.84073056924021,5.64709359630893,0.254094624222463,0,0.773288812777695,0.837581326671744,1.91381625495949,9.73709131131337,8.97484377612075,11.189218862773,0,1.50051156317903,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,2.0694614258501,0,0.921845842708516,0.347534457872331,1.76221041716467,1.37257369524342,0.206768026122887,2.37285620900479,2.02782359826544,0,1.66435439510497,0.604780586659361,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0,0.355123450626254,0.164254312027618,0,0.232420756919918,1.20859449591622,0,0.0920809889358963,0,0.364182336013434,0.524497659837696,0.451199612907412,0.231046011313244,3.13739907670742,1.46139224653261,0.105551628892876,0,0.340187410553031,0.215915916102139,3.08454505380579,0,0.501689773854853,0,0.831076008928724,0,0,0.261435451024901,0.769350375349168,1.31205858279882,0,2.88514832613622,1.19040304263846,0.330037999682352,0,0,0,0.386682873168488,0.462145851343933,0.307007349452259,0.137836572484531,0.107420244868274,0.580066775656914,0.170453254832202,0.534192213880424,0.165284915360978,0.576570202095319,0,0.30347334256665,0,0,2.0911118104818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| ||
|short_description=p@chr9:132222772..132222790,+ | |short_description=p@chr9:132222772..132222790,+ | ||
}} | }} |
Latest revision as of 23:25, 31 July 2015
Short description: | p@chr9:132222772..132222790, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132222772..132222790, + |
Coexpression cluster: | C4802_Mast_Neutrophils_Eosinophils_Natural_CD14_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.35e-26 | 72 |
classical monocyte | 3.53e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-26 | 42 |
defensive cell | 2.30e-21 | 48 |
phagocyte | 2.30e-21 | 48 |
leukocyte | 1.86e-19 | 136 |
granulocyte monocyte progenitor cell | 2.94e-18 | 67 |
myeloid lineage restricted progenitor cell | 1.01e-17 | 66 |
monopoietic cell | 8.34e-17 | 59 |
monocyte | 8.34e-17 | 59 |
monoblast | 8.34e-17 | 59 |
promonocyte | 8.34e-17 | 59 |
macrophage dendritic cell progenitor | 7.05e-16 | 61 |
hematopoietic cell | 1.73e-14 | 177 |
myeloid cell | 6.56e-14 | 108 |
common myeloid progenitor | 6.56e-14 | 108 |
hematopoietic stem cell | 6.98e-14 | 168 |
nongranular leukocyte | 6.12e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.18e-13 | 120 |
hematopoietic oligopotent progenitor cell | 4.06e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.06e-12 | 161 |
granulocyte | 2.26e-11 | 8 |
blood cell | 8.26e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.19e-25 | 98 |
blood island | 2.19e-25 | 98 |
hemolymphoid system | 2.77e-21 | 108 |
bone marrow | 4.01e-18 | 76 |
bone element | 1.27e-16 | 82 |
immune system | 6.13e-15 | 93 |
skeletal element | 9.66e-15 | 90 |
skeletal system | 6.43e-12 | 100 |
lateral plate mesoderm | 1.71e-10 | 203 |
blood | 1.72e-08 | 15 |
haemolymphatic fluid | 1.72e-08 | 15 |
organism substance | 1.72e-08 | 15 |
adult organism | 5.32e-07 | 114 |