FFCP PHASE1:Hg19::chr17:25936882..25936893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8844 | |EntrezGene=8844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6465 | |HGNC=6465 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_uc002gzn.2_5end | |association_with_transcript=-46bp_to_uc002gzn.2_5end | ||
|cluster_id=chr17:25936882..25936893,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_14_at_KSR1_5end | |description=CAGE_peak_14_at_KSR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p14@KSR1 | |short_description=p14@KSR1 | ||
}} | }} |
Latest revision as of 04:08, 19 September 2015
Short description: | p14@KSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KSR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -46bp_to_uc002gzn.2_5end |
EntrezGene: | KSR1 |
HGNC: | 6465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 1.46e-50 | 1 |
pole of cerebral hemisphere | 1.46e-50 | 1 |
occipital lobe | 2.22e-40 | 5 |
neocortex | 5.11e-22 | 20 |
regional part of cerebral cortex | 3.39e-20 | 22 |
cerebral cortex | 5.50e-18 | 25 |
pallium | 5.50e-18 | 25 |
regional part of telencephalon | 2.21e-14 | 32 |
cerebral hemisphere | 2.21e-14 | 32 |
brain grey matter | 1.29e-13 | 34 |
gray matter | 1.29e-13 | 34 |
telencephalon | 1.29e-13 | 34 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
regional part of forebrain | 1.67e-11 | 41 |
forebrain | 1.67e-11 | 41 |
anterior neural tube | 1.67e-11 | 41 |
future forebrain | 1.67e-11 | 41 |
parietal lobe | 3.60e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.82e-09 | 53 |
regional part of brain | 3.82e-09 | 53 |
neural tube | 1.04e-08 | 56 |
neural rod | 1.04e-08 | 56 |
future spinal cord | 1.04e-08 | 56 |
neural keel | 1.04e-08 | 56 |
pre-chordal neural plate | 4.50e-08 | 61 |
adult organism | 8.86e-08 | 114 |