FFCP PHASE1:Hg19::chr10:35379474..35379494,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8453 | |EntrezGene=8453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2552 | |HGNC=2552 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_uc001ixw.2_5end | |association_with_transcript=51bp_to_uc001ixw.2_5end | ||
|cluster_id=chr10:35379474..35379494,- | |||
|description=CAGE_peak_5_at_CUL2_5end | |description=CAGE_peak_5_at_CUL2_5end | ||
|id=chr10:35379474..35379494,- | |id=chr10:35379474..35379494,- | ||
|ontology_enrichment_celltype=CL:0000738!2.26e-20!140;CL:0000037!1.96e-18!172;CL:0000566!1.96e-18!172;CL:0000988!9.43e-17!182;CL:0002087!1.04e-16!119;CL:0002032!2.22e-16!165;CL:0000837!2.22e-16!165;CL:0002031!1.17e-15!124;CL:0000766!1.25e-15!76;CL:0002057!8.68e-15!42;CL:0000860!7.46e-14!45;CL:0000557!2.57e-13!71;CL:0000839!5.66e-13!70;CL:0002194!2.05e-12!63;CL:0000576!2.05e-12!63;CL:0000040!2.05e-12!63;CL:0000559!2.05e-12!63;CL:0000763!2.15e-12!112;CL:0000049!2.15e-12!112;CL:0002009!3.69e-12!65 | |ontology_enrichment_celltype=CL:0000738!2.26e-20!140;CL:0000037!1.96e-18!172;CL:0000566!1.96e-18!172;CL:0000988!9.43e-17!182;CL:0002087!1.04e-16!119;CL:0002032!2.22e-16!165;CL:0000837!2.22e-16!165;CL:0002031!1.17e-15!124;CL:0000766!1.25e-15!76;CL:0002057!8.68e-15!42;CL:0000860!7.46e-14!45;CL:0000557!2.57e-13!71;CL:0000839!5.66e-13!70;CL:0002194!2.05e-12!63;CL:0000576!2.05e-12!63;CL:0000040!2.05e-12!63;CL:0000559!2.05e-12!63;CL:0000763!2.15e-12!112;CL:0000049!2.15e-12!112;CL:0002009!3.69e-12!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-17;33!CL:0002057;3.42e-17;33!CL:0000473;1.97e-13;39!CL:0000234;1.97e-13;39!CL:0000576;1.65e-10;48!CL:0000766;1.36e-09;69!CL:0002087;8.30e-08;104!CL:0000738;6.32e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.42e-17;33!CL:0002057;3.42e-17;33!CL:0000473;1.97e-13;39!CL:0000234;1.97e-13;39!CL:0000576;1.65e-10;48!CL:0000766;1.36e-09;69!CL:0002087;8.30e-08;104!CL:0000738;6.32e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.57e-29,136;CL:0000037,8.24e-23,168;CL:0002087,1.88e-22,115;CL:0000988,2.04e-22,177;CL:0000766,1.99e-21,72;CL:0002031,3.09e-21,120;CL:0002032,2.54e-20,161;CL:0000837,2.54e-20,161;CL:0000860,7.55e-18,42;CL:0002057,7.55e-18,42;CL:0000557,8.10e-18,67;CL:0000839,1.13e-16,66;CL:0000473,1.24e-16,48;CL:0000234,1.24e-16,48;CL:0002009,4.01e-16,61;CL:0002194,6.40e-16,59;CL:0000576,6.40e-16,59;CL:0000040,6.40e-16,59;CL:0000559,6.40e-16,59;CL:0000763,1.88e-14,108;CL:0000049,1.88e-14,108;CL:0000034,1.40e-08,441;CL:0000134,4.32e-08,354;CL:0000048,5.78e-08,427;CL:0000723,1.14e-07,433;CL:0002320,2.21e-07,361;CL:0000219,2.76e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.96e-14;42 | |ontology_enrichment_development_v019=CL:0002057;8.96e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.28e-12!112;UBERON:0001474!2.13e-12!86;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0002371!2.14e-11!80;UBERON:0002405!9.83e-10!115;UBERON:0004765!3.63e-09!101;UBERON:0001434!3.63e-09!101 | |ontology_enrichment_uberon=UBERON:0002193!1.28e-12!112;UBERON:0001474!2.13e-12!86;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0002371!2.14e-11!80;UBERON:0002405!9.83e-10!115;UBERON:0004765!3.63e-09!101;UBERON:0001434!3.63e-09!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.48e-17,108;UBERON:0002405,2.00e-16,93;UBERON:0002390,6.10e-16,98;UBERON:0003061,6.10e-16,98;UBERON:0001474,6.21e-16,82;UBERON:0002371,2.00e-15,76;UBERON:0004765,4.40e-13,90;UBERON:0001434,6.98e-11,100;UBERON:0003081,2.67e-09,203 | |||
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| ||
|short_description=p5@CUL2 | |short_description=p5@CUL2 | ||
}} | }} |
Latest revision as of 01:37, 18 September 2015
Short description: | p5@CUL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CUL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_uc001ixw.2_5end |
EntrezGene: | CUL2 |
HGNC: | 2552 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.57e-29 | 136 |
hematopoietic stem cell | 8.24e-23 | 168 |
nongranular leukocyte | 1.88e-22 | 115 |
hematopoietic cell | 2.04e-22 | 177 |
myeloid leukocyte | 1.99e-21 | 72 |
hematopoietic lineage restricted progenitor cell | 3.09e-21 | 120 |
hematopoietic oligopotent progenitor cell | 2.54e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.54e-20 | 161 |
classical monocyte | 7.55e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.55e-18 | 42 |
granulocyte monocyte progenitor cell | 8.10e-18 | 67 |
myeloid lineage restricted progenitor cell | 1.13e-16 | 66 |
defensive cell | 1.24e-16 | 48 |
phagocyte | 1.24e-16 | 48 |
macrophage dendritic cell progenitor | 4.01e-16 | 61 |
monopoietic cell | 6.40e-16 | 59 |
monocyte | 6.40e-16 | 59 |
monoblast | 6.40e-16 | 59 |
promonocyte | 6.40e-16 | 59 |
myeloid cell | 1.88e-14 | 108 |
common myeloid progenitor | 1.88e-14 | 108 |
stem cell | 1.40e-08 | 441 |
mesenchymal cell | 4.32e-08 | 354 |
multi fate stem cell | 5.78e-08 | 427 |
somatic stem cell | 1.14e-07 | 433 |
connective tissue cell | 2.21e-07 | 361 |
motile cell | 2.76e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.48e-17 | 108 |
immune system | 2.00e-16 | 93 |
hematopoietic system | 6.10e-16 | 98 |
blood island | 6.10e-16 | 98 |
bone element | 6.21e-16 | 82 |
bone marrow | 2.00e-15 | 76 |
skeletal element | 4.40e-13 | 90 |
skeletal system | 6.98e-11 | 100 |
lateral plate mesoderm | 2.67e-09 | 203 |