FFCP PHASE1:Hg19::chr13:38160359..38160428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38160359..38160428,- | |||
|coexpression_cluster_id=C349 | |coexpression_cluster_id=C349 | ||
|description=CAGE_peak_at_chr13:38160359..38160428,- | |description=CAGE_peak_at_chr13:38160359..38160428,- | ||
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|ontology_enrichment_celltype=CL:0000055!6.47e-29!180;CL:0000057!6.29e-18!75;CL:0000680!8.70e-17!57;CL:0000056!8.70e-17!57;CL:0000355!8.70e-17!57;CL:0000187!5.18e-15!54;CL:0000183!9.69e-13!59;CL:0000393!2.45e-12!60;CL:0000211!2.45e-12!60;CL:0002334!2.70e-12!12;CL:0000192!2.14e-09!42;CL:0000514!2.14e-09!42;CL:0000048!2.99e-09!430;CL:0000723!4.94e-09!436;CL:0000222!6.26e-09!119;CL:0002494!1.17e-08!16;CL:0000034!1.48e-08!444;CL:0000359!1.56e-08!32;CL:0002548!2.17e-07!6 | |ontology_enrichment_celltype=CL:0000055!6.47e-29!180;CL:0000057!6.29e-18!75;CL:0000680!8.70e-17!57;CL:0000056!8.70e-17!57;CL:0000355!8.70e-17!57;CL:0000187!5.18e-15!54;CL:0000183!9.69e-13!59;CL:0000393!2.45e-12!60;CL:0000211!2.45e-12!60;CL:0002334!2.70e-12!12;CL:0000192!2.14e-09!42;CL:0000514!2.14e-09!42;CL:0000048!2.99e-09!430;CL:0000723!4.94e-09!436;CL:0000222!6.26e-09!119;CL:0002494!1.17e-08!16;CL:0000034!1.48e-08!444;CL:0000359!1.56e-08!32;CL:0002548!2.17e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.90e-16;12!CL:0002548;2.60e-12;6!CL:1000306;3.46e-08;4!CL:0002547;3.46e-08;4!CL:0002580;1.34e-07;3!CL:0002494;3.01e-07;16!CL:0000057;5.11e-07;73 | |ontology_enrichment_celltype_v019=CL:0002334;6.90e-16;12!CL:0002548;2.60e-12;6!CL:1000306;3.46e-08;4!CL:0002547;3.46e-08;4!CL:0002580;1.34e-07;3!CL:0002494;3.01e-07;16!CL:0000057;5.11e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.26e-19,76;CL:0002334,6.35e-16,12;CL:0002548,2.96e-12,6;CL:1000306,3.95e-08,4;CL:0002547,3.95e-08,4;CL:0002580,1.21e-07,3;CL:0002494,3.43e-07,16;CL:0000048,6.39e-07,427 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.08e-07!14 | |ontology_enrichment_disease=DOID:2394!1.08e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;9.23e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;9.23e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.00e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004797;3.46e-08;4!UBERON:0000415;3.46e-08;4!UBERON:0007240;3.46e-08;4!UBERON:0005742;3.46e-08;4!UBERON:0005734;3.46e-08;4!UBERON:0004664;3.46e-08;4!UBERON:0004663;3.46e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0004797;3.46e-08;4!UBERON:0000415;3.46e-08;4!UBERON:0007240;3.46e-08;4!UBERON:0005742;3.46e-08;4!UBERON:0005734;3.46e-08;4!UBERON:0004664;3.46e-08;4!UBERON:0004663;3.46e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.95e-08,4;UBERON:0007240,3.95e-08,4;UBERON:0005742,3.95e-08,4;UBERON:0005734,3.95e-08,4;UBERON:0004664,3.95e-08,4;UBERON:0004663,3.95e-08,4;UBERON:0000948,5.43e-08,24;UBERON:0005498,5.43e-08,24;UBERON:0004140,5.43e-08,24;UBERON:0009881,5.43e-08,24;UBERON:0004141,5.43e-08,24;UBERON:0003084,5.43e-08,24;UBERON:0007005,5.43e-08,24;UBERON:0004139,5.43e-08,24;UBERON:0004291,5.43e-08,24;UBERON:0007100,7.79e-07,27 | |||
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| ||
|short_description=p@chr13:38160359..38160428,- | |short_description=p@chr13:38160359..38160428,- | ||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38160359..38160428, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38160359..38160428, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.26e-19 | 76 |
preadipocyte | 6.35e-16 | 12 |
cardiac fibroblast | 2.96e-12 | 6 |
fibroblast of tunica adventitia of artery | 3.95e-08 | 4 |
fibroblast of the aortic adventitia | 3.95e-08 | 4 |
preadipocyte of the breast | 1.21e-07 | 3 |
cardiocyte | 3.43e-07 | 16 |
multi fate stem cell | 6.39e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.95e-08 | 4 |
tunica adventitia of artery | 3.95e-08 | 4 |
adventitia | 3.95e-08 | 4 |
tunica adventitia of blood vessel | 3.95e-08 | 4 |
aorta tunica adventitia | 3.95e-08 | 4 |
aorta wall | 3.95e-08 | 4 |
heart | 5.43e-08 | 24 |
primitive heart tube | 5.43e-08 | 24 |
primary heart field | 5.43e-08 | 24 |
anterior lateral plate mesoderm | 5.43e-08 | 24 |
heart tube | 5.43e-08 | 24 |
heart primordium | 5.43e-08 | 24 |
cardiac mesoderm | 5.43e-08 | 24 |
cardiogenic plate | 5.43e-08 | 24 |
heart rudiment | 5.43e-08 | 24 |
primary circulatory organ | 7.79e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.00e-09 | 14 |