FFCP PHASE1:Hg19::chr1:25870089..25870161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26119 | |EntrezGene=26119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18640 | |HGNC=18640 | ||
|TSSclassifier=strong | |||
|UniProt=B3KR97,Q5SW96 | |UniProt=B3KR97,Q5SW96 | ||
|association_with_transcript=13bp_to_NM_015627,uc001bkl.3_5end | |association_with_transcript=13bp_to_NM_015627,uc001bkl.3_5end | ||
|cluster_id=chr1:25870089..25870161,+ | |||
|description=CAGE_peak_1_at_LDLRAP1_5end | |description=CAGE_peak_1_at_LDLRAP1_5end | ||
|id=chr1:25870089..25870161,+ | |id=chr1:25870089..25870161,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.10e-10!18;CL:0000789!5.10e-10!18;CL:0002420!5.10e-10!18;CL:0002419!5.10e-10!18;CL:0000790!5.10e-10!18;CL:0000625!4.83e-08!11 | |ontology_enrichment_celltype=CL:0000791!5.10e-10!18;CL:0000789!5.10e-10!18;CL:0002420!5.10e-10!18;CL:0002419!5.10e-10!18;CL:0000790!5.10e-10!18;CL:0000625!4.83e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.86e-10;18!CL:0000789;4.86e-10;18!CL:0002419;4.86e-10;18!CL:0000625;4.52e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;4.86e-10;18!CL:0000789;4.86e-10;18!CL:0002419;4.86e-10;18!CL:0000625;4.52e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.10e-10,18;CL:0000789,5.10e-10,18;CL:0002420,5.10e-10,18;CL:0002419,5.10e-10,18;CL:0000790,5.10e-10,18;CL:0000625,4.83e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.86e-10;18 | |ontology_enrichment_development_v019=CL:0000790;4.86e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-10!115;UBERON:0003076!8.16e-07!15;UBERON:0003057!8.16e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.39e-10!115;UBERON:0003076!8.16e-07!15;UBERON:0003057!8.16e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.08e-11,114;UBERON:0003076,8.16e-07,15;UBERON:0003057,8.16e-07,15 | |||
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| ||
|short_description=p1@LDLRAP1 | |short_description=p1@LDLRAP1 | ||
}} | }} |
Latest revision as of 03:30, 17 September 2015
Short description: | p1@LDLRAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LDLRAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_015627, uc001bkl.3_5end |
EntrezGene: | LDLRAP1 |
HGNC: | 18640 |
UniProt: | B3KR97Q5SW96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.10e-10 | 18 |
alpha-beta T cell | 5.10e-10 | 18 |
immature T cell | 5.10e-10 | 18 |
mature T cell | 5.10e-10 | 18 |
immature alpha-beta T cell | 5.10e-10 | 18 |
CD8-positive, alpha-beta T cell | 4.83e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.08e-11 | 114 |
posterior neural tube | 8.16e-07 | 15 |
chordal neural plate | 8.16e-07 | 15 |