FFCP PHASE1:Mm9::chr17:8718110..8718119,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23984 | |EntrezGene=23984 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=278 | |MCL_coexpression_id=278 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENSMUST00000115715_5end | |association_with_transcript=-117bp_to_ENSMUST00000115715_5end | ||
|cluster_id=chr17:8718110..8718119,+ | |||
|description=CAGE_peak_18_at_Pde10a_5end | |description=CAGE_peak_18_at_Pde10a_5end | ||
|id=chr17:8718110..8718119,+ | |id=chr17:8718110..8718119,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.32e-13!71;UBERON:0003075!1.32e-13!71;UBERON:0007284!1.32e-13!71;UBERON:0000955!2.98e-11!50;UBERON:0006238!2.98e-11!50;UBERON:0001049!8.76e-11!52;UBERON:0005068!8.76e-11!52;UBERON:0006241!8.76e-11!52;UBERON:0007135!8.76e-11!52;UBERON:0002021!1.20e-10!10;UBERON:0000411!1.20e-10!10;UBERON:0001950!1.20e-10!10;UBERON:0002616!1.54e-10!49;UBERON:0000033!1.79e-10!63;UBERON:0004121!4.07e-10!102;UBERON:0000924!4.07e-10!102;UBERON:0006601!4.07e-10!102;UBERON:0001017!1.34e-09!73;UBERON:0005743!1.34e-09!73;UBERON:0000073!4.36e-09!75;UBERON:0001016!4.36e-09!75;UBERON:0003080!7.97e-08!40;UBERON:0002619!1.42e-07!17;UBERON:0002780!4.09e-07!39;UBERON:0001890!4.09e-07!39;UBERON:0006240!4.09e-07!39;UBERON:0000956!7.53e-07!21;UBERON:0001869!7.53e-07!21;UBERON:0000203!7.53e-07!21;UBERON:0003056!8.85e-07!49 | |ontology_enrichment_uberon=UBERON:0002346!1.32e-13!71;UBERON:0003075!1.32e-13!71;UBERON:0007284!1.32e-13!71;UBERON:0000955!2.98e-11!50;UBERON:0006238!2.98e-11!50;UBERON:0001049!8.76e-11!52;UBERON:0005068!8.76e-11!52;UBERON:0006241!8.76e-11!52;UBERON:0007135!8.76e-11!52;UBERON:0002021!1.20e-10!10;UBERON:0000411!1.20e-10!10;UBERON:0001950!1.20e-10!10;UBERON:0002616!1.54e-10!49;UBERON:0000033!1.79e-10!63;UBERON:0004121!4.07e-10!102;UBERON:0000924!4.07e-10!102;UBERON:0006601!4.07e-10!102;UBERON:0001017!1.34e-09!73;UBERON:0005743!1.34e-09!73;UBERON:0000073!4.36e-09!75;UBERON:0001016!4.36e-09!75;UBERON:0003080!7.97e-08!40;UBERON:0002619!1.42e-07!17;UBERON:0002780!4.09e-07!39;UBERON:0001890!4.09e-07!39;UBERON:0006240!4.09e-07!39;UBERON:0000956!7.53e-07!21;UBERON:0001869!7.53e-07!21;UBERON:0000203!7.53e-07!21;UBERON:0003056!8.85e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.22e-21,10;UBERON:0000411,1.22e-21,10;UBERON:0001950,1.22e-21,10;UBERON:0000956,1.04e-14,21;UBERON:0001869,1.04e-14,21;UBERON:0000203,1.04e-14,21;UBERON:0002619,8.30e-13,17;UBERON:0002616,8.39e-12,46;UBERON:0000955,1.53e-11,47;UBERON:0006238,1.53e-11,47;UBERON:0002780,1.08e-10,39;UBERON:0001890,1.08e-10,39;UBERON:0006240,1.08e-10,39;UBERON:0003528,1.24e-10,29;UBERON:0002791,1.24e-10,29;UBERON:0001893,1.24e-10,29;UBERON:0003080,2.02e-10,40;UBERON:0001049,2.15e-10,52;UBERON:0005068,2.15e-10,52;UBERON:0006241,2.15e-10,52;UBERON:0007135,2.15e-10,52;UBERON:0000073,5.42e-10,54;UBERON:0010314,4.56e-09,92;UBERON:0002020,4.75e-09,34;UBERON:0003056,1.90e-08,49;UBERON:0002346,2.33e-08,64;UBERON:0003075,2.33e-08,64;UBERON:0007284,2.33e-08,64;UBERON:0010371,2.89e-07,73;UBERON:0001017,2.89e-07,73;UBERON:0001016,4.66e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,3.56261133755579,0.693941307064543,0,1.84492397804847,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0.484875253135222,0,2.34224637609238,0.628340120440365,0,0.11981512450592,0,0.127070227073065,0.599162557619291,0,0,1.56441888173049,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,6.12791290356818,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0.469343416127421,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0.679913719975421,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,1.6942555278512,0.460325236507177,0,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,2.07104124700728,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,3.56261133755579,0.693941307064543,0,1.84492397804847,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0.484875253135222,0,2.34224637609238,0.628340120440365,0,0.11981512450592,0,0.127070227073065,0.599162557619291,0,0,1.56441888173049,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,6.12791290356818,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0.469343416127421,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0.679913719975421,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,1.6942555278512,0.460325236507177,0,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,2.07104124700728,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p18@Pde10a | |short_description=p18@Pde10a | ||
}} | }} |
Latest revision as of 23:59, 26 September 2015
Short description: | p18@Pde10a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Pde10a_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | -117bp_to_ENSMUST00000115715_5end |
EntrezGene: | Pde10a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.22e-21 | 10 |
visual cortex | 1.22e-21 | 10 |
neocortex | 1.22e-21 | 10 |
cerebral cortex | 1.04e-14 | 21 |
cerebral hemisphere | 1.04e-14 | 21 |
pallium | 1.04e-14 | 21 |
regional part of cerebral cortex | 8.30e-13 | 17 |
regional part of brain | 8.39e-12 | 46 |
brain | 1.53e-11 | 47 |
future brain | 1.53e-11 | 47 |
regional part of forebrain | 1.08e-10 | 39 |
forebrain | 1.08e-10 | 39 |
future forebrain | 1.08e-10 | 39 |
brain grey matter | 1.24e-10 | 29 |
regional part of telencephalon | 1.24e-10 | 29 |
telencephalon | 1.24e-10 | 29 |
anterior neural tube | 2.02e-10 | 40 |
neural tube | 2.15e-10 | 52 |
neural rod | 2.15e-10 | 52 |
future spinal cord | 2.15e-10 | 52 |
neural keel | 2.15e-10 | 52 |
regional part of nervous system | 5.42e-10 | 54 |
structure with developmental contribution from neural crest | 4.56e-09 | 92 |
gray matter | 4.75e-09 | 34 |
pre-chordal neural plate | 1.90e-08 | 49 |
neurectoderm | 2.33e-08 | 64 |
neural plate | 2.33e-08 | 64 |
presumptive neural plate | 2.33e-08 | 64 |
ecto-epithelium | 2.89e-07 | 73 |
central nervous system | 2.89e-07 | 73 |
nervous system | 4.66e-07 | 75 |