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FFCP PHASE1:Mm9::chrX:97925256..97925302,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71584
|EntrezGene=71584
|HGNC=
|HGNC=
|MCL_coexpression_id=3765
|MCL_coexpression_id=3765
|TSSclassifier=NA
|UniProt=Q9ESM6
|UniProt=Q9ESM6
|association_with_transcript=0bp_to_ENSMUST00000019503,ENSMUST00000156336_5end
|association_with_transcript=0bp_to_ENSMUST00000019503,ENSMUST00000156336_5end
|cluster_id=chrX:97925256..97925302,+
|description=CAGE_peak_3_at_Gdpd2_5end
|description=CAGE_peak_3_at_Gdpd2_5end
|id=chrX:97925256..97925302,+
|id=chrX:97925256..97925302,+
|ontology_enrichment_celltype=CL:0002319!1.44e-13!43;CL:0000221!2.07e-13!44;CL:0000133!2.07e-13!44;CL:0000055!6.21e-13!50;CL:0000393!1.99e-10!39;CL:0000211!1.99e-10!39;CL:0000540!2.82e-10!33;CL:0000047!2.82e-10!33;CL:0000031!2.82e-10!33;CL:0000404!2.82e-10!33
|ontology_enrichment_celltype=CL:0002319!1.44e-13!43;CL:0000221!2.07e-13!44;CL:0000133!2.07e-13!44;CL:0000055!6.21e-13!50;CL:0000393!1.99e-10!39;CL:0000211!1.99e-10!39;CL:0000540!2.82e-10!33;CL:0000047!2.82e-10!33;CL:0000031!2.82e-10!33;CL:0000404!2.82e-10!33
|ontology_enrichment_celltype_v019_2=CL:0002319,6.92e-15,43;CL:0000221,3.62e-14,44;CL:0000133,3.62e-14,44;CL:0000540,1.42e-11,33;CL:0000047,1.42e-11,33;CL:0000031,1.42e-11,33;CL:0000404,1.42e-11,33;CL:0000393,1.67e-11,39;CL:0000211,1.67e-11,39;CL:0000117,1.97e-07,23;CL:0000337,1.97e-07,23;CL:0002321,5.98e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.46e-17!73;UBERON:0005743!2.46e-17!73;UBERON:0000073!8.62e-17!75;UBERON:0001016!8.62e-17!75;UBERON:0004121!1.40e-15!102;UBERON:0000924!1.40e-15!102;UBERON:0006601!1.40e-15!102;UBERON:0002346!2.47e-10!71;UBERON:0003075!2.47e-10!71;UBERON:0007284!2.47e-10!71;UBERON:0001049!4.99e-09!52;UBERON:0005068!4.99e-09!52;UBERON:0006241!4.99e-09!52;UBERON:0007135!4.99e-09!52;UBERON:0000033!4.69e-08!63;UBERON:0000955!1.05e-07!50;UBERON:0006238!1.05e-07!50;UBERON:0002616!1.16e-07!49;UBERON:0002020!3.85e-07!34
|ontology_enrichment_uberon=UBERON:0001017!2.46e-17!73;UBERON:0005743!2.46e-17!73;UBERON:0000073!8.62e-17!75;UBERON:0001016!8.62e-17!75;UBERON:0004121!1.40e-15!102;UBERON:0000924!1.40e-15!102;UBERON:0006601!1.40e-15!102;UBERON:0002346!2.47e-10!71;UBERON:0003075!2.47e-10!71;UBERON:0007284!2.47e-10!71;UBERON:0001049!4.99e-09!52;UBERON:0005068!4.99e-09!52;UBERON:0006241!4.99e-09!52;UBERON:0007135!4.99e-09!52;UBERON:0000033!4.69e-08!63;UBERON:0000955!1.05e-07!50;UBERON:0006238!1.05e-07!50;UBERON:0002616!1.16e-07!49;UBERON:0002020!3.85e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-16,73;UBERON:0001016,4.68e-16,75;UBERON:0004121,1.81e-14,95;UBERON:0000924,1.81e-14,95;UBERON:0006601,1.81e-14,95;UBERON:0002346,2.53e-09,64;UBERON:0003075,2.53e-09,64;UBERON:0007284,2.53e-09,64;UBERON:0010371,3.86e-09,73;UBERON:0000073,1.55e-08,54;UBERON:0001049,1.01e-07,52;UBERON:0005068,1.01e-07,52;UBERON:0006241,1.01e-07,52;UBERON:0007135,1.01e-07,52;UBERON:0002020,3.75e-07,34
|phase1_expression=2.88267924788629,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,1.99865857089398,3.84703008040669,1.39912375625629,0.157731082679119,0,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5140067862145,12.7734933336588,16.5192076945513,0.782391344348039,30.741547049643,38.4450819785326,29.5533446592911,9.23910382727393,23.0004102983955,0,0,0,0,0.286533439938757,0.515672092277442,4.24864567805155,6.34789175126439,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,10.7856039786626,17.28982373947,1.65903379693564,1.08004750665353,1.05162480675691,7.42692559449889,5.96345060569357,0.61245399607477,1.24599112323707,0,6.60695285996332,3.19218345212969,3.99376986466233,3.16527090552465,3.47653045689157,4.68822033501084,5.30447698102624,3.37657566019008,3.0559649555362,7.36571463684169,5.26775218956681,4.10078780815661,0.075726193333184,1.13357340160178,0,0,0,0,0,0,2.24711072210803,3.57903677413921,1.29893002301434,2.47337702157238,0.985903938436763,2.56652954828636,15.2883143823987,0,0,0,0,1.25602267690966,0.258937883647172,0,0.693941307064543,1.82679286987285,1.15307748628029,1.50722640552623,1.52865319276416,0.125666591329675,0.494389935468748,0,18.5768215909474,7.27950824763341,6.40440403535141,8.24287930329878,0,0.585561594023094,0.628340120440365,0,0,0,0,3.89455662452539,2.28750301409313,1.88481528169297,1.73824320192276,1.79000820131231,4.1557608911912,1.62241263067758,6.00852246716866,9.82815067819735,0.252722758433675,0.841767423545896,1.82168620147785,1.60931473103431,2.16074555766419,2.86339153887859,1.97305847538851,0.768682321709099,1.21812241927647,1.81092359517311,0,0.756424320671277,0.175951124163949,0.657587197282725,0.834141747676794,1.0447564995665,3.2925141825271,2.38841120182192,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0,0.465067889500816,0,0.583826711835847,0.658239399653922,0.656669856316381,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,3.15434922846191,3.39585220851639,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.494096864172033,1.00534083520108,0.795825888164603,0.19496408711912,0,0,0,0.379335801906163,0.571242563048644,4.50830942692322,0.407302655690628,1.16371492300575,0.701358198903186,0.189709611372772,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.575392274901621,0,0,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0.162964976442026,0.169745085775188,0.234690248288502,1.17254380209271,5.95109102215034,9.36641509717434,1.7339865851681,0.44292937929755,0.637819074629948,1.14704320301017,1.20879487306127,6.79850575333104,0,0,0,0.275936746304732,4.97706828962155,3.39913891117389,1.3114795630134,0.757412781613119,2.2085575359138,4.29482618726302,11.8482868753039,3.58453196928828,2.45078541490634,3.39691836946599,2.83367491172426,3.79932615284705,3.55759000151871,1.28528526568723,6.38730383437209,6.23229612835393,4.72372182125371,4.94910368917606,0,1.21390318077491,0.604647113929502,0.565815239267694,2.65771703592696,0.307435147943927,2.06742634534577,1.81766864738753,1.78248689192361,0.948110273807448,0,1.03135543248187,0.340439605753788,1.08036656418786,0.776152102696527,0.857348140126369,1.24138163549592,1.96205699362278,2.30368628842969,1.2178597964584,10.0908834467395,0.21183207086382,0.220528398054962,1.15420377059036,2.58343082713449,2.0506394475573,1.43246812803764,1.14898629821543,0.582961673259701,4.07935664423121,35.0285305635598,44.1667897441296,116.487357715549,26.5599524376614,35.5404992074665,30.8850533828806,0,0,0,0,0,3.04979200690273,0.86404272657441,1.88179466413022,2.62035076495413,1.61837215661785,0.909188012978695,0.26175594198403,0,0,0,1.64468200648377,0.827292452285488,0.972255941720238,1.03327858782185,2.19642963138012,0.469428954583016,1.3020438484395,1.04859344425711,0.724752362478018,0.288030006257865,0,1.21635129174099,1.1298205288131,0.389762468933385,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0.187682475451182,1.09890974560359,0,1.50471631210609,2.82375921308533,3.22227665555024,1.14579102687879,1.71853182343688,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,3.17199686288943,0.51776031175182,0.415149390336707,1.99512436700516,2.56100408631201,2.67417388775123,0.628839487883947,1.10306105070008,2.00022055021454,2.67845574410562,2.24643446714271,2.77966932940177,1.52087579934144,2.07488975524684,1.87283014939765,0.960377286073039,2.06767688240208,2.85776214769844,0.927074607558844,1.54327376370964,3.70877310722976,1.91358596174717,2.05721551431249,1.95223386775271,1.66905332963125,2.32554266611726,1.2234219453993,1.4384483341585,0.914639864363863,2.10455769150274,1.35804113845862,0.561142271657738,2.01679530811096,0.788035859004508,1.63692417267876,0.929621047115796,1.73615949883027,2.49810577937946,3.27504251823572,3.22306581072447,3.06061331310149,3.08827986767322,3.47801753430632
|phase1_expression=2.88267924788629,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,1.99865857089398,3.84703008040669,1.39912375625629,0.157731082679119,0,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5140067862145,12.7734933336588,16.5192076945513,0.782391344348039,30.741547049643,38.4450819785326,29.5533446592911,9.23910382727393,23.0004102983955,0,0,0,0,0.286533439938757,0.515672092277442,4.24864567805155,6.34789175126439,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,10.7856039786626,17.28982373947,1.65903379693564,1.08004750665353,1.05162480675691,7.42692559449889,5.96345060569357,0.61245399607477,1.24599112323707,0,6.60695285996332,3.19218345212969,3.99376986466233,3.16527090552465,3.47653045689157,4.68822033501084,5.30447698102624,3.37657566019008,3.0559649555362,7.36571463684169,5.26775218956681,4.10078780815661,0.075726193333184,1.13357340160178,0,0,0,0,0,0,2.24711072210803,3.57903677413921,1.29893002301434,2.47337702157238,0.985903938436763,2.56652954828636,15.2883143823987,0,0,0,0,1.25602267690966,0.258937883647172,0,0.693941307064543,1.82679286987285,1.15307748628029,1.50722640552623,1.52865319276416,0.125666591329675,0.494389935468748,0,18.5768215909474,7.27950824763341,6.40440403535141,8.24287930329878,0,0.585561594023094,0.628340120440365,0,0,0,0,3.89455662452539,2.28750301409313,1.88481528169297,1.73824320192276,1.79000820131231,4.1557608911912,1.62241263067758,6.00852246716866,9.82815067819735,0.252722758433675,0.841767423545896,1.82168620147785,1.60931473103431,2.16074555766419,2.86339153887859,1.97305847538851,0.768682321709099,1.21812241927647,1.81092359517311,0,0.756424320671277,0.175951124163949,0.657587197282725,0.834141747676794,1.0447564995665,3.2925141825271,2.38841120182192,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0,0.465067889500816,0,0.583826711835847,0.658239399653922,0.656669856316381,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,3.15434922846191,3.39585220851639,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.494096864172033,1.00534083520108,0.795825888164603,0.19496408711912,0,0,0,0.379335801906163,0.571242563048644,4.50830942692322,0.407302655690628,1.16371492300575,0.701358198903186,0.189709611372772,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.575392274901621,0,0,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0.162964976442026,0.169745085775188,0.234690248288502,1.17254380209271,5.95109102215034,9.36641509717434,1.7339865851681,0.44292937929755,0.637819074629948,1.14704320301017,1.20879487306127,6.79850575333104,0,0,0,0.275936746304732,4.97706828962155,3.39913891117389,1.3114795630134,0.757412781613119,2.2085575359138,4.29482618726302,11.8482868753039,3.58453196928828,2.45078541490634,3.39691836946599,2.83367491172426,3.79932615284705,3.55759000151871,1.28528526568723,6.38730383437209,6.23229612835393,4.72372182125371,4.94910368917606,0,1.21390318077491,0.604647113929502,0.565815239267694,2.65771703592696,0.307435147943927,2.06742634534577,1.81766864738753,1.78248689192361,0.948110273807448,0,1.03135543248187,0.340439605753788,1.08036656418786,0.776152102696527,0.857348140126369,1.24138163549592,1.96205699362278,2.30368628842969,1.2178597964584,10.0908834467395,0.21183207086382,0.220528398054962,1.15420377059036,2.58343082713449,2.0506394475573,1.43246812803764,1.14898629821543,0.582961673259701,4.07935664423121,35.0285305635598,44.1667897441296,116.487357715549,26.5599524376614,35.5404992074665,30.8850533828806,0,0,0,0,0,3.04979200690273,0.86404272657441,1.88179466413022,2.62035076495413,1.61837215661785,0.909188012978695,0.26175594198403,0,0,0,1.64468200648377,0.827292452285488,0.972255941720238,1.03327858782185,2.19642963138012,0.469428954583016,1.3020438484395,1.04859344425711,0.724752362478018,0.288030006257865,0,1.21635129174099,1.1298205288131,0.389762468933385,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0.187682475451182,1.09890974560359,0,1.50471631210609,2.82375921308533,3.22227665555024,1.14579102687879,1.71853182343688,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,3.17199686288943,0.51776031175182,0.415149390336707,1.99512436700516,2.56100408631201,2.67417388775123,0.628839487883947,1.10306105070008,2.00022055021454,2.67845574410562,2.24643446714271,2.77966932940177,1.52087579934144,2.07488975524684,1.87283014939765,0.960377286073039,2.06767688240208,2.85776214769844,0.927074607558844,1.54327376370964,3.70877310722976,1.91358596174717,2.05721551431249,1.95223386775271,1.66905332963125,2.32554266611726,1.2234219453993,1.4384483341585,0.914639864363863,2.10455769150274,1.35804113845862,0.561142271657738,2.01679530811096,0.788035859004508,1.63692417267876,0.929621047115796,1.73615949883027,2.49810577937946,3.27504251823572,3.22306581072447,3.06061331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|short_description=p3@Gdpd2
|short_description=p3@Gdpd2
}}
}}

Latest revision as of 00:55, 2 October 2015

Short description:p3@Gdpd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gdpd2_5end
Coexpression cluster:MCL_coexpression_mm9:3765
Association with transcript: 0bp_to_ENSMUST00000019503, ENSMUST00000156336_5end
EntrezGene:Gdpd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gdpd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.77
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B838.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C329.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E817.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.98
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.85
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G235.03
spleen, embryo E16.CNhs11035.461-43C144.17
spleen, embryo E18.CNhs11011.1271-21F2116.49
spleen, neonate N10.CNhs11116.752-24D126.56
spleen, neonate N20.CNhs11112.824-19H135.54
spleen, neonate N25.CNhs11099.1354-25G330.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell6.92e-1543
ectodermal cell3.62e-1444
neurectodermal cell3.62e-1444
neuron1.42e-1133
neuronal stem cell1.42e-1133
neuroblast1.42e-1133
electrically signaling cell1.42e-1133
electrically responsive cell1.67e-1139
electrically active cell1.67e-1139
CNS neuron (sensu Vertebrata)1.97e-0723
neuroblast (sensu Vertebrata)1.97e-0723
embryonic cell5.98e-0770

Uber anatomy
Ontology termp-valuen
central nervous system1.27e-1673
nervous system4.68e-1675
ectoderm-derived structure1.81e-1495
ectoderm1.81e-1495
presumptive ectoderm1.81e-1495
neurectoderm2.53e-0964
neural plate2.53e-0964
presumptive neural plate2.53e-0964
ecto-epithelium3.86e-0973
regional part of nervous system1.55e-0854
neural tube1.01e-0752
neural rod1.01e-0752
future spinal cord1.01e-0752
neural keel1.01e-0752
gray matter3.75e-0734
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