FFCP PHASE1:Mm9::chr16:36935062..36935099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15163 | |EntrezGene=15163 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |||
|UniProt=P49710,Q8CA06 | |UniProt=P49710,Q8CA06 | ||
|association_with_transcript=0bp_to_ENSMUST00000023531,NM_008225,uc007zdi.2_5end | |association_with_transcript=0bp_to_ENSMUST00000023531,NM_008225,uc007zdi.2_5end | ||
|cluster_id=chr16:36935062..36935099,+ | |||
|description=CAGE_peak_1_at_Hcls1_5end | |description=CAGE_peak_1_at_Hcls1_5end | ||
|id=chr16:36935062..36935099,+ | |id=chr16:36935062..36935099,+ | ||
|ontology_enrichment_celltype=CL:0000988!8.43e-11!32;CL:0002032!8.43e-11!32;CL:0000037!8.43e-11!32;CL:0000566!8.43e-11!32;CL:0000837!8.43e-11!32;CL:0002031!6.54e-09!25;CL:0000738!9.11e-09!17;CL:0002087!9.11e-09!17;CL:0000838!9.91e-08!12;CL:0002320!3.07e-07!46;CL:0000134!3.07e-07!46;CL:0000084!4.35e-07!11;CL:0000827!4.35e-07!11;CL:0000542!7.73e-07!13;CL:0000051!7.73e-07!13 | |ontology_enrichment_celltype=CL:0000988!8.43e-11!32;CL:0002032!8.43e-11!32;CL:0000037!8.43e-11!32;CL:0000566!8.43e-11!32;CL:0000837!8.43e-11!32;CL:0002031!6.54e-09!25;CL:0000738!9.11e-09!17;CL:0002087!9.11e-09!17;CL:0000838!9.91e-08!12;CL:0002320!3.07e-07!46;CL:0000134!3.07e-07!46;CL:0000084!4.35e-07!11;CL:0000827!4.35e-07!11;CL:0000542!7.73e-07!13;CL:0000051!7.73e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.36e-11,32;CL:0002032,7.36e-11,32;CL:0000037,7.36e-11,32;CL:0000837,7.36e-11,32;CL:0002031,5.79e-09,25;CL:0000738,8.58e-09,17;CL:0002087,8.58e-09,17;CL:0000838,9.41e-08,12;CL:0002320,2.90e-07,46;CL:0000134,2.90e-07,46;CL:0000084,4.16e-07,11;CL:0000827,4.16e-07,11;CL:0000542,7.39e-07,13;CL:0000051,7.39e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.25e-21!70;UBERON:0002193!5.39e-20!48;UBERON:0002390!1.54e-18!45;UBERON:0003061!1.54e-18!45;UBERON:0003081!2.41e-13!88;UBERON:0005057!1.76e-11!51;UBERON:0000926!2.18e-11!193;UBERON:0004120!2.18e-11!193;UBERON:0006603!2.18e-11!193;UBERON:0004177!3.65e-10!29;UBERON:0002371!2.08e-09!16;UBERON:0001474!9.79e-09!22;UBERON:0004765!9.79e-09!22;UBERON:0001434!9.79e-09!22;UBERON:0000077!2.05e-08!97;UBERON:0001041!2.61e-08!92;UBERON:0003104!3.58e-08!131;UBERON:0009142!3.58e-08!131;UBERON:0002204!8.07e-08!32;UBERON:0003408!8.14e-08!24;UBERON:0002370!1.42e-07!23;UBERON:0000974!1.42e-07!23;UBERON:0004807!1.42e-07!23;UBERON:0005058!1.42e-07!23;UBERON:0003351!1.42e-07!23;UBERON:0009113!1.42e-07!23;UBERON:0003295!1.42e-07!23;UBERON:0009722!1.42e-07!23;UBERON:0005562!1.42e-07!23;UBERON:0007690!1.42e-07!23;UBERON:0006562!2.74e-07!24;UBERON:0001557!2.74e-07!24;UBERON:0001042!2.74e-07!24;UBERON:0008814!2.74e-07!24;UBERON:0009145!2.74e-07!24;UBERON:0002384!3.07e-07!46 | |ontology_enrichment_uberon=UBERON:0002405!3.25e-21!70;UBERON:0002193!5.39e-20!48;UBERON:0002390!1.54e-18!45;UBERON:0003061!1.54e-18!45;UBERON:0003081!2.41e-13!88;UBERON:0005057!1.76e-11!51;UBERON:0000926!2.18e-11!193;UBERON:0004120!2.18e-11!193;UBERON:0006603!2.18e-11!193;UBERON:0004177!3.65e-10!29;UBERON:0002371!2.08e-09!16;UBERON:0001474!9.79e-09!22;UBERON:0004765!9.79e-09!22;UBERON:0001434!9.79e-09!22;UBERON:0000077!2.05e-08!97;UBERON:0001041!2.61e-08!92;UBERON:0003104!3.58e-08!131;UBERON:0009142!3.58e-08!131;UBERON:0002204!8.07e-08!32;UBERON:0003408!8.14e-08!24;UBERON:0002370!1.42e-07!23;UBERON:0000974!1.42e-07!23;UBERON:0004807!1.42e-07!23;UBERON:0005058!1.42e-07!23;UBERON:0003351!1.42e-07!23;UBERON:0009113!1.42e-07!23;UBERON:0003295!1.42e-07!23;UBERON:0009722!1.42e-07!23;UBERON:0005562!1.42e-07!23;UBERON:0007690!1.42e-07!23;UBERON:0006562!2.74e-07!24;UBERON:0001557!2.74e-07!24;UBERON:0001042!2.74e-07!24;UBERON:0008814!2.74e-07!24;UBERON:0009145!2.74e-07!24;UBERON:0002384!3.07e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.24e-20,48;UBERON:0002405,3.24e-20,48;UBERON:0002390,9.41e-19,45;UBERON:0003061,9.41e-19,45;UBERON:0003081,5.78e-13,87;UBERON:0004177,2.50e-10,29;UBERON:0005057,2.50e-10,29;UBERON:0000077,5.45e-10,35;UBERON:0000926,1.58e-09,120;UBERON:0004120,1.58e-09,120;UBERON:0006603,1.58e-09,120;UBERON:0002371,1.95e-09,16;UBERON:0001041,4.47e-09,80;UBERON:0001474,9.71e-09,22;UBERON:0004765,9.71e-09,22;UBERON:0001434,9.71e-09,22;UBERON:0003408,5.80e-08,24;UBERON:0002204,8.05e-08,32;UBERON:0002370,1.01e-07,23;UBERON:0000974,1.01e-07,23;UBERON:0004807,1.01e-07,23;UBERON:0005058,1.01e-07,23;UBERON:0003351,1.01e-07,23;UBERON:0009113,1.01e-07,23;UBERON:0003295,1.01e-07,23;UBERON:0009722,1.01e-07,23;UBERON:0005562,1.01e-07,23;UBERON:0007690,1.01e-07,23;UBERON:0006562,1.98e-07,24;UBERON:0001557,1.98e-07,24;UBERON:0001042,1.98e-07,24;UBERON:0008814,1.98e-07,24;UBERON:0009145,1.98e-07,24;UBERON:0002384,2.90e-07,46;UBERON:0002530,8.78e-07,65 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,143.32688902015,42.5181940898034,52.8985829487705,82.0134067800169,65.0143095811992,119.840510951844,110.237127450356,51.9651228432434,52.4410942539649,30.0811607595103,168.929989549336,163.577519291646,118.40471285165,7.313722952992,72.1845215230436,69.2179441218179,41.7580223490791,39.2289870624861,0.57423196411502,0,0.861884930743556,3.6104449696711,3.78045194639896,5.76499327703792,0.635030673459631,0,0,0.288851619751275,0,0,666.720887763894,369.571617959758,590.534783202444,695.289618852659,612.008754522767,610.28651376016,0.251793635951155,0,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.699932108126813,0,220.466344359866,157.403584816462,143.848146032975,9.77585856936598,10.3152038377952,5.15672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,167.831297272981,175.029346174354,181.882909426202,44.0412162462055,24.974189845901,0.311068836925433,1.21505344498522,0.841299845405528,1.71390590642282,3.97563373712904,0.367472397644862,1.53352753629178,0.919218786610021,2.20231761998777,3.19218345212969,2.91852413186863,0.395658863190582,1.00636407962651,1.56274011167028,3.62937898701795,1.12552522006336,3.51435969886663,1.17851434189467,3.27454865837937,1.3047961207771,4.84647637332378,0.982430281388212,15.9425468785923,15.487629785665,0,0.539703191637817,3.24888208723835,2.68816132258401,16.993774835942,1.70430322578058,1.55871602761721,1.7666978725517,0.14084341977668,2.56652954828636,0,0,0,0,0,13.1311461676919,140.08539505312,16.7739617143252,3.64319186208885,5.78484408793068,7.14908041493781,5.42601505989441,7.99603208522793,9.04799457573663,1.73036477414062,11.5679485535929,82.2687813313383,12.2942805960031,37.1013751013461,34.911018225736,1.86391761218122,0.292780797011547,0.83778682725382,10.9846533739694,50.2025371679806,54.5911485204001,47.143054244107,2.24685959107234,3.20250421973039,0.628271760564322,2.78118912307642,2.55715457330331,2.90903262383384,3.40706652442291,4.3790926455636,40.3078584776701,4.0435641349388,5.26104639716185,1.56144531555244,1.60931473103431,2.34080768746954,2.10986744970001,1.49680298132921,2.17793324484245,2.15513966487376,1.81092359517311,1.29340795759705,1.51284864134255,1.93546236580344,3.94552318369635,5.56094498451196,4.179025998266,5.76189981942242,2.58744546864041,71.6257451059499,57.9032791008109,43.1928519081301,2.69263504296152,3.28336483973535,4.32148947506436,3.78791576936336,6.68998387941173,2.93107514486019,2.79040733700489,2.68273401399619,4.90414437942112,6.08871444679878,10.8350526292203,7.78260571640215,10.2339991197733,20.1986106067767,15.4337381574428,2.94405927989778,1.64647379806855,13.8775888853195,3.96675849995316,2.55945900642281,2.55460339046482,4.76809606891745,6.45387278794696,10.229390016864,10.4624094361908,7.59246498471219,7.08205505313247,11.8127548136127,9.54991065797524,11.8928093142663,12.5834717211591,10.3746263939853,8.96135729644652,2.65535061334314,3.54170389090159,3.38123207019241,2.44381593414377,1.93952487167626,3.22624771495465,3.35153646758564,4.13308414342886,9.57692239832386,4.07210640941942,10.6722945751374,11.0117769772622,7.86235980452812,11.4679677316275,17.0402501966342,15.9176925436595,20.3700681425136,24.1664755458681,27.562988551756,23.0631587077988,64.6956929373095,28.6548529704748,16.8500343481863,12.6289438973556,7.71408878144222,6.75420929908714,35.4726125119881,1.89491411770485,1.79261474086228,3.90413697282933,3.52035372432753,6.53274404023081,10.4739201989846,11.1226179278945,14.5024332577696,14.3952048271704,13.0752910299139,25.5626770956551,36.2638461918381,22.7099021972973,257.853095536156,295.884691997378,7.37646409528554,14.0727740615414,2.24770825982909,3.28192722458169,0,9.3414243065618,0,0,0,0,0,0,0,0,0,1.28528526568723,6.95506417520516,3.91744328067962,3.58351310577867,12.0428189769951,5.30980553359851,3.39892890616974,3.62788268357701,3.01768127609437,6.20133975049623,6.7635732547664,9.04499026088774,7.27067458955011,4.9909632973861,7.9009189483954,4.21674434299995,4.12542172992747,3.74483566329167,1.26042765821917,2.97524972700335,3.64372959553707,2.48276327099183,4.45922044005176,1.81003922662333,1.522324745573,14.7843176080138,5.50763384245932,2.20528398054962,9.0687439117814,7.58882805470756,5.36785031860587,4.53614907211919,3.11867709515616,12.8251568117134,4.26478194624172,77.0627672398316,39.2135049130123,53.1508293551072,45.5851665951352,58.5051294645988,81.9025860079351,104.706712876215,102.304511648594,100.333180982012,4.77335309007557,1.26534397432454,3.25311147402958,4.32021363287205,3.76358932826044,4.80397640241591,3.50647300600534,6.94289028092822,6.54389854960074,6.09190374471426,15.5334828271731,0,0.897099276263873,1.15820943319968,0.972255941720238,2.71235629303235,2.36538575687089,3.99014611395563,2.47388331203505,1.46803082195995,0.483168241652012,1.15212002503146,83.7429469664672,30.6115075088148,39.851851379953,54.9565081196073,48.5162345258875,56.0281420483167,70.0739470701418,74.2878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|phase1_expression=2.5623815536767,0,0,0,0,0,0,143.32688902015,42.5181940898034,52.8985829487705,82.0134067800169,65.0143095811992,119.840510951844,110.237127450356,51.9651228432434,52.4410942539649,30.0811607595103,168.929989549336,163.577519291646,118.40471285165,7.313722952992,72.1845215230436,69.2179441218179,41.7580223490791,39.2289870624861,0.57423196411502,0,0.861884930743556,3.6104449696711,3.78045194639896,5.76499327703792,0.635030673459631,0,0,0.288851619751275,0,0,666.720887763894,369.571617959758,590.534783202444,695.289618852659,612.008754522767,610.28651376016,0.251793635951155,0,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.699932108126813,0,220.466344359866,157.403584816462,143.848146032975,9.77585856936598,10.3152038377952,5.15672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,167.831297272981,175.029346174354,181.882909426202,44.0412162462055,24.974189845901,0.311068836925433,1.21505344498522,0.841299845405528,1.71390590642282,3.97563373712904,0.367472397644862,1.53352753629178,0.919218786610021,2.20231761998777,3.19218345212969,2.91852413186863,0.395658863190582,1.00636407962651,1.56274011167028,3.62937898701795,1.12552522006336,3.51435969886663,1.17851434189467,3.27454865837937,1.3047961207771,4.84647637332378,0.982430281388212,15.9425468785923,15.487629785665,0,0.539703191637817,3.24888208723835,2.68816132258401,16.993774835942,1.70430322578058,1.55871602761721,1.7666978725517,0.14084341977668,2.56652954828636,0,0,0,0,0,13.1311461676919,140.08539505312,16.7739617143252,3.64319186208885,5.78484408793068,7.14908041493781,5.42601505989441,7.99603208522793,9.04799457573663,1.73036477414062,11.5679485535929,82.2687813313383,12.2942805960031,37.1013751013461,34.911018225736,1.86391761218122,0.292780797011547,0.83778682725382,10.9846533739694,50.2025371679806,54.5911485204001,47.143054244107,2.24685959107234,3.20250421973039,0.628271760564322,2.78118912307642,2.55715457330331,2.90903262383384,3.40706652442291,4.3790926455636,40.3078584776701,4.0435641349388,5.26104639716185,1.56144531555244,1.60931473103431,2.34080768746954,2.10986744970001,1.49680298132921,2.17793324484245,2.15513966487376,1.81092359517311,1.29340795759705,1.51284864134255,1.93546236580344,3.94552318369635,5.56094498451196,4.179025998266,5.76189981942242,2.58744546864041,71.6257451059499,57.9032791008109,43.1928519081301,2.69263504296152,3.28336483973535,4.32148947506436,3.78791576936336,6.68998387941173,2.93107514486019,2.79040733700489,2.68273401399619,4.90414437942112,6.08871444679878,10.8350526292203,7.78260571640215,10.2339991197733,20.1986106067767,15.4337381574428,2.94405927989778,1.64647379806855,13.8775888853195,3.96675849995316,2.55945900642281,2.55460339046482,4.76809606891745,6.45387278794696,10.229390016864,10.4624094361908,7.59246498471219,7.08205505313247,11.8127548136127,9.54991065797524,11.8928093142663,12.5834717211591,10.3746263939853,8.96135729644652,2.65535061334314,3.54170389090159,3.38123207019241,2.44381593414377,1.93952487167626,3.22624771495465,3.35153646758564,4.13308414342886,9.57692239832386,4.07210640941942,10.6722945751374,11.0117769772622,7.86235980452812,11.4679677316275,17.0402501966342,15.9176925436595,20.3700681425136,24.1664755458681,27.562988551756,23.0631587077988,64.6956929373095,28.6548529704748,16.8500343481863,12.6289438973556,7.71408878144222,6.75420929908714,35.4726125119881,1.89491411770485,1.79261474086228,3.90413697282933,3.52035372432753,6.53274404023081,10.4739201989846,11.1226179278945,14.5024332577696,14.3952048271704,13.0752910299139,25.5626770956551,36.2638461918381,22.7099021972973,257.853095536156,295.884691997378,7.37646409528554,14.0727740615414,2.24770825982909,3.28192722458169,0,9.3414243065618,0,0,0,0,0,0,0,0,0,1.28528526568723,6.95506417520516,3.91744328067962,3.58351310577867,12.0428189769951,5.30980553359851,3.39892890616974,3.62788268357701,3.01768127609437,6.20133975049623,6.7635732547664,9.04499026088774,7.27067458955011,4.9909632973861,7.9009189483954,4.21674434299995,4.12542172992747,3.74483566329167,1.26042765821917,2.97524972700335,3.64372959553707,2.48276327099183,4.45922044005176,1.81003922662333,1.522324745573,14.7843176080138,5.50763384245932,2.20528398054962,9.0687439117814,7.58882805470756,5.36785031860587,4.53614907211919,3.11867709515616,12.8251568117134,4.26478194624172,77.0627672398316,39.2135049130123,53.1508293551072,45.5851665951352,58.5051294645988,81.9025860079351,104.706712876215,102.304511648594,100.333180982012,4.77335309007557,1.26534397432454,3.25311147402958,4.32021363287205,3.76358932826044,4.80397640241591,3.50647300600534,6.94289028092822,6.54389854960074,6.09190374471426,15.5334828271731,0,0.897099276263873,1.15820943319968,0.972255941720238,2.71235629303235,2.36538575687089,3.99014611395563,2.47388331203505,1.46803082195995,0.483168241652012,1.15212002503146,83.7429469664672,30.6115075088148,39.851851379953,54.9565081196073,48.5162345258875,56.0281420483167,70.0739470701418,74.2878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| ||
|short_description=p1@Hcls1 | |short_description=p1@Hcls1 | ||
}} | }} |
Latest revision as of 23:25, 1 October 2015
Short description: | p1@Hcls1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hcls1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000023531, NM_008225, uc007zdi.2_5end |
EntrezGene: | Hcls1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.36e-11 | 32 |
hematopoietic oligopotent progenitor cell | 7.36e-11 | 32 |
hematopoietic stem cell | 7.36e-11 | 32 |
hematopoietic multipotent progenitor cell | 7.36e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 5.79e-09 | 25 |
leukocyte | 8.58e-09 | 17 |
nongranular leukocyte | 8.58e-09 | 17 |
lymphoid lineage restricted progenitor cell | 9.41e-08 | 12 |
connective tissue cell | 2.90e-07 | 46 |
mesenchymal cell | 2.90e-07 | 46 |
T cell | 4.16e-07 | 11 |
pro-T cell | 4.16e-07 | 11 |
lymphocyte | 7.39e-07 | 13 |
common lymphoid progenitor | 7.39e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.24e-20 | 48 |
immune system | 3.24e-20 | 48 |
hematopoietic system | 9.41e-19 | 45 |
blood island | 9.41e-19 | 45 |
lateral plate mesoderm | 5.78e-13 | 87 |
hemopoietic organ | 2.50e-10 | 29 |
immune organ | 2.50e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 5.45e-10 | 35 |
mesoderm | 1.58e-09 | 120 |
mesoderm-derived structure | 1.58e-09 | 120 |
presumptive mesoderm | 1.58e-09 | 120 |
bone marrow | 1.95e-09 | 16 |
foregut | 4.47e-09 | 80 |
bone element | 9.71e-09 | 22 |
skeletal element | 9.71e-09 | 22 |
skeletal system | 9.71e-09 | 22 |
gland of gut | 5.80e-08 | 24 |
musculoskeletal system | 8.05e-08 | 32 |
thymus | 1.01e-07 | 23 |
neck | 1.01e-07 | 23 |
respiratory system epithelium | 1.01e-07 | 23 |
hemolymphoid system gland | 1.01e-07 | 23 |
pharyngeal epithelium | 1.01e-07 | 23 |
thymic region | 1.01e-07 | 23 |
pharyngeal gland | 1.01e-07 | 23 |
entire pharyngeal arch endoderm | 1.01e-07 | 23 |
thymus primordium | 1.01e-07 | 23 |
early pharyngeal endoderm | 1.01e-07 | 23 |
pharynx | 1.98e-07 | 24 |
upper respiratory tract | 1.98e-07 | 24 |
chordate pharynx | 1.98e-07 | 24 |
pharyngeal arch system | 1.98e-07 | 24 |
pharyngeal region of foregut | 1.98e-07 | 24 |
connective tissue | 2.90e-07 | 46 |
gland | 8.78e-07 | 65 |