FFCP PHASE1:Hg19::chr2:208031099..208031115,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:208031099..208031115,+
|short_description=p@chr2:208031099..208031115,+
|description=CAGE_peak_at_chr2:208031099..208031115,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:208031099..208031115,+ | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_at_chr2:208031099..208031115,+ | |||
|id=chr2:208031099..208031115,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.60e-24!42;CL:0000860!8.81e-21!45;CL:0000738!3.11e-20!140;CL:0000766!8.37e-19!76;CL:0000557!5.72e-16!71;CL:0002087!1.97e-14!119;CL:0002031!2.39e-14!124;CL:0002009!5.51e-14!65;CL:0002194!3.30e-13!63;CL:0000576!3.30e-13!63;CL:0000040!3.30e-13!63;CL:0000559!3.30e-13!63;CL:0000839!4.02e-13!70;CL:0000988!4.63e-12!182;CL:0000037!1.44e-11!172;CL:0000566!1.44e-11!172;CL:0002032!3.33e-10!165;CL:0000837!3.33e-10!165;CL:0000763!1.98e-08!112;CL:0000049!1.98e-08!112;CL:0002393!3.52e-07!9;CL:0002397!3.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-17;33!CL:0002057;1.80e-17;33!CL:0000576;1.85e-13;48!CL:0000473;1.47e-12;39!CL:0000234;1.47e-12;39!CL:0000766;2.13e-11;69!CL:0002087;7.06e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-24,42;CL:0002057,1.23e-24,42;CL:0000738,1.05e-22,136;CL:0000473,8.57e-22,48;CL:0000234,8.57e-22,48;CL:0000766,1.04e-21,72;CL:0000557,1.12e-18,67;CL:0002087,1.31e-16,115;CL:0002009,1.33e-16,61;CL:0002031,1.48e-16,120;CL:0002194,8.97e-16,59;CL:0000576,8.97e-16,59;CL:0000040,8.97e-16,59;CL:0000559,8.97e-16,59;CL:0000839,1.31e-15,66;CL:0000988,6.84e-14,177;CL:0000037,1.88e-13,168;CL:0002032,5.52e-12,161;CL:0000837,5.52e-12,161;CL:0000763,4.47e-10,108;CL:0000049,4.47e-10,108;CL:0002393,3.30e-07,9;CL:0002397,3.30e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.99e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-19!102;UBERON:0003061!1.86e-19!102;UBERON:0002193!1.08e-17!112;UBERON:0002371!1.52e-14!80;UBERON:0001474!4.74e-12!86;UBERON:0003081!2.77e-10!216;UBERON:0002405!2.83e-09!115;UBERON:0004765!4.07e-09!101;UBERON:0001434!4.07e-09!101;UBERON:0001049!2.14e-08!57;UBERON:0005068!2.14e-08!57;UBERON:0006241!2.14e-08!57;UBERON:0007135!2.14e-08!57;UBERON:0000178!1.47e-07!15;UBERON:0000179!1.47e-07!15;UBERON:0000463!1.47e-07!15;UBERON:0001017!7.07e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-07;15!UBERON:0000179;1.43e-07;15!UBERON:0000463;1.43e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.58e-22,98;UBERON:0003061,6.58e-22,98;UBERON:0002193,7.40e-20,108;UBERON:0002371,8.63e-17,76;UBERON:0002405,3.30e-14,93;UBERON:0001474,4.27e-14,82;UBERON:0004765,3.66e-13,90;UBERON:0003081,1.13e-11,203;UBERON:0001434,3.46e-10,100;UBERON:0001049,2.71e-08,56;UBERON:0005068,2.71e-08,56;UBERON:0006241,2.71e-08,56;UBERON:0007135,2.71e-08,56;UBERON:0000178,1.37e-07,15;UBERON:0000179,1.37e-07,15;UBERON:0000463,1.37e-07,15;UBERON:0000073,1.91e-07,53;UBERON:0002616,1.91e-07,53;UBERON:0001017,8.37e-07,81 | |||
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| ||
|short_description=p@chr2:208031099..208031115,+ | |||
}} | }} |
Latest revision as of 05:27, 29 July 2015
Short description: | p@chr2:208031099..208031115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:208031099..208031115, + |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-24 | 42 |
leukocyte | 1.05e-22 | 136 |
defensive cell | 8.57e-22 | 48 |
phagocyte | 8.57e-22 | 48 |
myeloid leukocyte | 1.04e-21 | 72 |
granulocyte monocyte progenitor cell | 1.12e-18 | 67 |
nongranular leukocyte | 1.31e-16 | 115 |
macrophage dendritic cell progenitor | 1.33e-16 | 61 |
hematopoietic lineage restricted progenitor cell | 1.48e-16 | 120 |
monopoietic cell | 8.97e-16 | 59 |
monocyte | 8.97e-16 | 59 |
monoblast | 8.97e-16 | 59 |
promonocyte | 8.97e-16 | 59 |
myeloid lineage restricted progenitor cell | 1.31e-15 | 66 |
hematopoietic cell | 6.84e-14 | 177 |
hematopoietic stem cell | 1.88e-13 | 168 |
hematopoietic oligopotent progenitor cell | 5.52e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.52e-12 | 161 |
myeloid cell | 4.47e-10 | 108 |
common myeloid progenitor | 4.47e-10 | 108 |
intermediate monocyte | 3.30e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.58e-22 | 98 |
blood island | 6.58e-22 | 98 |
hemolymphoid system | 7.40e-20 | 108 |
bone marrow | 8.63e-17 | 76 |
immune system | 3.30e-14 | 93 |
bone element | 4.27e-14 | 82 |
skeletal element | 3.66e-13 | 90 |
lateral plate mesoderm | 1.13e-11 | 203 |
skeletal system | 3.46e-10 | 100 |
neural tube | 2.71e-08 | 56 |
neural rod | 2.71e-08 | 56 |
future spinal cord | 2.71e-08 | 56 |
neural keel | 2.71e-08 | 56 |
blood | 1.37e-07 | 15 |
haemolymphatic fluid | 1.37e-07 | 15 |
organism substance | 1.37e-07 | 15 |
regional part of nervous system | 1.91e-07 | 53 |
regional part of brain | 1.91e-07 | 53 |
central nervous system | 8.37e-07 | 81 |