FFCP PHASE1:Mm9::chrX:133371161..133371170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=751 | |MCL_coexpression_id=751 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:133371161..133371170,+ | |||
|description=CAGE_peak_at_chrX:133371161..133371170,+ | |description=CAGE_peak_at_chrX:133371161..133371170,+ | ||
|id=chrX:133371161..133371170,+ | |id=chrX:133371161..133371170,+ | ||
|ontology_enrichment_celltype=CL:0002610!1.50e-09!3;CL:0000540!4.11e-09!33;CL:0000047!4.11e-09!33;CL:0000031!4.11e-09!33;CL:0000404!4.11e-09!33;CL:0002614!4.54e-09!3;CL:0002319!9.41e-09!43;CL:0000221!1.74e-08!44;CL:0000133!1.74e-08!44;CL:0000117!4.33e-08!23;CL:0000337!4.33e-08!23;CL:0000393!2.52e-07!39;CL:0000211!2.52e-07!39;CL:0000055!4.11e-07!50 | |ontology_enrichment_celltype=CL:0002610!1.50e-09!3;CL:0000540!4.11e-09!33;CL:0000047!4.11e-09!33;CL:0000031!4.11e-09!33;CL:0000404!4.11e-09!33;CL:0002614!4.54e-09!3;CL:0002319!9.41e-09!43;CL:0000221!1.74e-08!44;CL:0000133!1.74e-08!44;CL:0000117!4.33e-08!23;CL:0000337!4.33e-08!23;CL:0000393!2.52e-07!39;CL:0000211!2.52e-07!39;CL:0000055!4.11e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.16e-30,3;CL:0002614,8.96e-14,3;CL:0000117,6.80e-11,23;CL:0000337,6.80e-11,23;CL:0000540,1.27e-07,33;CL:0000047,1.27e-07,33;CL:0000031,1.27e-07,33;CL:0000404,1.27e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.41e-25!75;UBERON:0001016!3.41e-25!75;UBERON:0001017!1.88e-22!73;UBERON:0005743!1.88e-22!73;UBERON:0000955!6.53e-19!50;UBERON:0006238!6.53e-19!50;UBERON:0004121!3.08e-18!102;UBERON:0000924!3.08e-18!102;UBERON:0006601!3.08e-18!102;UBERON:0001049!1.88e-17!52;UBERON:0005068!1.88e-17!52;UBERON:0006241!1.88e-17!52;UBERON:0007135!1.88e-17!52;UBERON:0002616!2.44e-17!49;UBERON:0002298!1.09e-15!6;UBERON:0000033!1.61e-15!63;UBERON:0002346!3.21e-14!71;UBERON:0003075!3.21e-14!71;UBERON:0007284!3.21e-14!71;UBERON:0003076!1.65e-12!12;UBERON:0003057!1.65e-12!12;UBERON:0002950!6.26e-11!4;UBERON:0001891!6.26e-11!4;UBERON:0009616!6.26e-11!4;UBERON:0002020!2.43e-10!34;UBERON:0007811!5.20e-10!86;UBERON:0004684!1.50e-09!3;UBERON:0002275!1.50e-09!3;UBERON:0002021!3.77e-09!10;UBERON:0000411!3.77e-09!10;UBERON:0001950!3.77e-09!10;UBERON:0002038!4.54e-09!3;UBERON:0002308!4.54e-09!3;UBERON:0009663!4.54e-09!3;UBERON:0009661!4.54e-09!3;UBERON:0006331!4.54e-09!3;UBERON:0000125!4.54e-09!3;UBERON:0000153!9.86e-09!94;UBERON:0003080!2.28e-08!40;UBERON:0003056!1.99e-07!49;UBERON:0002780!2.30e-07!39;UBERON:0001890!2.30e-07!39;UBERON:0006240!2.30e-07!39;UBERON:0002791!2.34e-07!29;UBERON:0003528!2.34e-07!29;UBERON:0001893!2.34e-07!29;UBERON:0004733!4.92e-07!6;UBERON:0004732!4.92e-07!6;UBERON:0002028!4.92e-07!6;UBERON:0007277!4.92e-07!6;UBERON:0002240!5.49e-07!6;UBERON:0005174!5.49e-07!6;UBERON:0001137!5.49e-07!6 | |ontology_enrichment_uberon=UBERON:0000073!3.41e-25!75;UBERON:0001016!3.41e-25!75;UBERON:0001017!1.88e-22!73;UBERON:0005743!1.88e-22!73;UBERON:0000955!6.53e-19!50;UBERON:0006238!6.53e-19!50;UBERON:0004121!3.08e-18!102;UBERON:0000924!3.08e-18!102;UBERON:0006601!3.08e-18!102;UBERON:0001049!1.88e-17!52;UBERON:0005068!1.88e-17!52;UBERON:0006241!1.88e-17!52;UBERON:0007135!1.88e-17!52;UBERON:0002616!2.44e-17!49;UBERON:0002298!1.09e-15!6;UBERON:0000033!1.61e-15!63;UBERON:0002346!3.21e-14!71;UBERON:0003075!3.21e-14!71;UBERON:0007284!3.21e-14!71;UBERON:0003076!1.65e-12!12;UBERON:0003057!1.65e-12!12;UBERON:0002950!6.26e-11!4;UBERON:0001891!6.26e-11!4;UBERON:0009616!6.26e-11!4;UBERON:0002020!2.43e-10!34;UBERON:0007811!5.20e-10!86;UBERON:0004684!1.50e-09!3;UBERON:0002275!1.50e-09!3;UBERON:0002021!3.77e-09!10;UBERON:0000411!3.77e-09!10;UBERON:0001950!3.77e-09!10;UBERON:0002038!4.54e-09!3;UBERON:0002308!4.54e-09!3;UBERON:0009663!4.54e-09!3;UBERON:0009661!4.54e-09!3;UBERON:0006331!4.54e-09!3;UBERON:0000125!4.54e-09!3;UBERON:0000153!9.86e-09!94;UBERON:0003080!2.28e-08!40;UBERON:0003056!1.99e-07!49;UBERON:0002780!2.30e-07!39;UBERON:0001890!2.30e-07!39;UBERON:0006240!2.30e-07!39;UBERON:0002791!2.34e-07!29;UBERON:0003528!2.34e-07!29;UBERON:0001893!2.34e-07!29;UBERON:0004733!4.92e-07!6;UBERON:0004732!4.92e-07!6;UBERON:0002028!4.92e-07!6;UBERON:0007277!4.92e-07!6;UBERON:0002240!5.49e-07!6;UBERON:0005174!5.49e-07!6;UBERON:0001137!5.49e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.16e-30,3;UBERON:0002275,1.16e-30,3;UBERON:0002038,8.96e-14,3;UBERON:0009663,8.96e-14,3;UBERON:0009661,8.96e-14,3;UBERON:0000125,8.96e-14,3;UBERON:0002308,8.96e-14,3;UBERON:0000073,2.15e-11,54;UBERON:0002950,1.41e-10,4;UBERON:0001891,1.41e-10,4;UBERON:0009616,1.41e-10,4;UBERON:0010286,1.41e-10,4;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,6.60695285996332,10.7257363991558,13.5173749265494,0,0,0,1.3959149950069,1.12552522006336,0.916789486660861,0.589257170947335,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.767146371990992,0.62336413367868,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.99259867206745,0,0,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0,1.37016503954128,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,6.60695285996332,10.7257363991558,13.5173749265494,0,0,0,1.3959149950069,1.12552522006336,0.916789486660861,0.589257170947335,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.767146371990992,0.62336413367868,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.99259867206745,0,0,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0,1.37016503954128,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chrX:133371161..133371170,+ | |short_description=p@chrX:133371161..133371170,+ | ||
}} | }} |
Latest revision as of 00:27, 6 August 2015
Short description: | p@chrX:133371161..133371170, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133371161..133371170, + |
Coexpression cluster: | MCL_coexpression_mm9:751 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.16e-30 | 3 |
neuron of the substantia nigra | 8.96e-14 | 3 |
CNS neuron (sensu Vertebrata) | 6.80e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.80e-11 | 23 |
neuron | 1.27e-07 | 33 |
neuronal stem cell | 1.27e-07 | 33 |
neuroblast | 1.27e-07 | 33 |
electrically signaling cell | 1.27e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.16e-30 | 3 |
reticular formation | 1.16e-30 | 3 |
substantia nigra | 8.96e-14 | 3 |
telencephalic nucleus | 8.96e-14 | 3 |
midbrain nucleus | 8.96e-14 | 3 |
neural nucleus | 8.96e-14 | 3 |
nucleus of brain | 8.96e-14 | 3 |
regional part of nervous system | 2.15e-11 | 54 |
regional part of midbrain | 1.41e-10 | 4 |
midbrain | 1.41e-10 | 4 |
presumptive midbrain | 1.41e-10 | 4 |
midbrain neural tube | 1.41e-10 | 4 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |