FFCP PHASE1:Mm9::chr1:173775852..173775866,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:173775852..173775866,+ | |||
|description=CAGE_peak_at_chr1:173775852..173775866,+ | |description=CAGE_peak_at_chr1:173775852..173775866,+ | ||
|id=chr1:173775852..173775866,+ | |id=chr1:173775852..173775866,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.28e-12!32;CL:0002032!1.28e-12!32;CL:0000037!1.28e-12!32;CL:0000566!1.28e-12!32;CL:0000837!1.28e-12!32;CL:0000049!6.59e-10!19;CL:0000893!1.14e-08!6;CL:0002489!1.14e-08!6;CL:0000898!1.14e-08!6;CL:0000809!1.14e-08!6;CL:0000810!1.14e-08!6;CL:0000895!1.14e-08!6;CL:0000808!1.14e-08!6;CL:0000894!1.14e-08!6;CL:0000806!1.14e-08!6;CL:0000807!1.14e-08!6;CL:0000805!1.14e-08!6;CL:0002425!1.14e-08!6;CL:0002436!1.14e-08!6;CL:0002427!1.14e-08!6;CL:0002428!1.14e-08!6;CL:0002429!1.14e-08!6;CL:0002433!1.14e-08!6;CL:0002431!1.14e-08!6;CL:0002432!1.14e-08!6;CL:0002320!1.88e-08!46;CL:0000134!1.88e-08!46;CL:0002031!2.06e-07!25;CL:0000723!4.24e-07!91;CL:0000048!4.24e-07!91;CL:0000219!4.91e-07!54 | |ontology_enrichment_celltype=CL:0000988!1.28e-12!32;CL:0002032!1.28e-12!32;CL:0000037!1.28e-12!32;CL:0000566!1.28e-12!32;CL:0000837!1.28e-12!32;CL:0000049!6.59e-10!19;CL:0000893!1.14e-08!6;CL:0002489!1.14e-08!6;CL:0000898!1.14e-08!6;CL:0000809!1.14e-08!6;CL:0000810!1.14e-08!6;CL:0000895!1.14e-08!6;CL:0000808!1.14e-08!6;CL:0000894!1.14e-08!6;CL:0000806!1.14e-08!6;CL:0000807!1.14e-08!6;CL:0000805!1.14e-08!6;CL:0002425!1.14e-08!6;CL:0002436!1.14e-08!6;CL:0002427!1.14e-08!6;CL:0002428!1.14e-08!6;CL:0002429!1.14e-08!6;CL:0002433!1.14e-08!6;CL:0002431!1.14e-08!6;CL:0002432!1.14e-08!6;CL:0002320!1.88e-08!46;CL:0000134!1.88e-08!46;CL:0002031!2.06e-07!25;CL:0000723!4.24e-07!91;CL:0000048!4.24e-07!91;CL:0000219!4.91e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.09e-13,9;CL:0002476,2.35e-07,2 | |||
|ontology_enrichment_disease=DOID:0060100!6.33e-18!3;DOID:4045!6.33e-18!3;DOID:0050686!3.09e-09!6 | |ontology_enrichment_disease=DOID:0060100!6.33e-18!3;DOID:4045!6.33e-18!3;DOID:0050686!3.09e-09!6 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.18e-37,3;DOID:4045,1.18e-37,3;DOID:0050686,2.81e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.88e-08!46;UBERON:0002204!6.37e-08!32;UBERON:0002390!7.61e-07!45;UBERON:0003061!7.61e-07!45 | |ontology_enrichment_uberon=UBERON:0002384!1.88e-08!46;UBERON:0002204!6.37e-08!32;UBERON:0002390!7.61e-07!45;UBERON:0003061!7.61e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.09e-13,9;UBERON:0002036,4.09e-13,9;UBERON:0002385,4.09e-13,9;UBERON:0000486,4.09e-13,9;UBERON:0007503,4.09e-13,9;UBERON:0001015,4.09e-13,9;UBERON:0002329,4.09e-13,9;UBERON:0003082,4.09e-13,9;UBERON:0003059,4.09e-13,9;UBERON:0007282,4.09e-13,9;UBERON:0004290,4.09e-13,9;UBERON:0009618,4.09e-13,9;UBERON:0000383,7.07e-12,10;UBERON:0007524,7.32e-11,11;UBERON:0003077,7.32e-11,11;UBERON:0007285,7.32e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0,0,0,0.174840804837995,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3003540298965,12.5013655123808,2.61761871986899,75.8818619560008,19.8083190637949,11.6522484727477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0,0,0,0.174840804837995,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3003540298965,12.5013655123808,2.61761871986899,75.8818619560008,19.8083190637949,11.6522484727477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:173775852..173775866,+ | |short_description=p@chr1:173775852..173775866,+ | ||
}} | }} |
Latest revision as of 06:47, 5 August 2015
Short description: | p@chr1:173775852..173775866, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173775852..173775866, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.09e-13 | 9 |
bone marrow macrophage | 2.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.09e-13 | 9 |
striated muscle tissue | 4.09e-13 | 9 |
muscle tissue | 4.09e-13 | 9 |
multilaminar epithelium | 4.09e-13 | 9 |
epithelial vesicle | 4.09e-13 | 9 |
musculature | 4.09e-13 | 9 |
somite | 4.09e-13 | 9 |
myotome | 4.09e-13 | 9 |
presomitic mesoderm | 4.09e-13 | 9 |
presumptive segmental plate | 4.09e-13 | 9 |
dermomyotome | 4.09e-13 | 9 |
trunk paraxial mesoderm | 4.09e-13 | 9 |
musculature of body | 7.07e-12 | 10 |
dense mesenchyme tissue | 7.32e-11 | 11 |
paraxial mesoderm | 7.32e-11 | 11 |
presumptive paraxial mesoderm | 7.32e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.18e-37 | 3 |
muscle cancer | 1.18e-37 | 3 |
organ system cancer | 2.81e-19 | 6 |