FFCP PHASE1:Mm9::chr1:53830966..53830975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:53830966..53830975,- | |||
|description=CAGE_peak_at_chr1:53830966..53830975,- | |description=CAGE_peak_at_chr1:53830966..53830975,- | ||
|id=chr1:53830966..53830975,- | |id=chr1:53830966..53830975,- | ||
|ontology_enrichment_celltype=CL:0000988!2.32e-15!32;CL:0002032!2.32e-15!32;CL:0000037!2.32e-15!32;CL:0000566!2.32e-15!32;CL:0000837!2.32e-15!32;CL:0002031!9.24e-11!25;CL:0000791!3.91e-10!9;CL:0000789!3.91e-10!9;CL:0002420!3.91e-10!9;CL:0002419!3.91e-10!9;CL:0000790!3.91e-10!9;CL:0000838!5.73e-10!12;CL:0002320!1.20e-09!46;CL:0000134!1.20e-09!46;CL:0000542!4.04e-09!13;CL:0000051!4.04e-09!13;CL:0000084!3.70e-08!11;CL:0000827!3.70e-08!11;CL:0000624!5.06e-08!8;CL:0000219!9.96e-08!54;CL:0000049!1.12e-07!19;CL:0000553!2.15e-07!6;CL:0000556!2.15e-07!6;CL:0000034!2.37e-07!97;CL:0000738!9.97e-07!17;CL:0002087!9.97e-07!17 | |ontology_enrichment_celltype=CL:0000988!2.32e-15!32;CL:0002032!2.32e-15!32;CL:0000037!2.32e-15!32;CL:0000566!2.32e-15!32;CL:0000837!2.32e-15!32;CL:0002031!9.24e-11!25;CL:0000791!3.91e-10!9;CL:0000789!3.91e-10!9;CL:0002420!3.91e-10!9;CL:0002419!3.91e-10!9;CL:0000790!3.91e-10!9;CL:0000838!5.73e-10!12;CL:0002320!1.20e-09!46;CL:0000134!1.20e-09!46;CL:0000542!4.04e-09!13;CL:0000051!4.04e-09!13;CL:0000084!3.70e-08!11;CL:0000827!3.70e-08!11;CL:0000624!5.06e-08!8;CL:0000219!9.96e-08!54;CL:0000049!1.12e-07!19;CL:0000553!2.15e-07!6;CL:0000556!2.15e-07!6;CL:0000034!2.37e-07!97;CL:0000738!9.97e-07!17;CL:0002087!9.97e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.24e-08,1;CL:0000355,5.41e-08,9;CL:0000988,6.89e-08,32;CL:0002032,6.89e-08,32;CL:0000037,6.89e-08,32;CL:0000837,6.89e-08,32;CL:0000791,8.37e-08,9;CL:0000789,8.37e-08,9;CL:0002420,8.37e-08,9;CL:0002419,8.37e-08,9;CL:0000790,8.37e-08,9;CL:0002031,2.86e-07,25 | |||
|ontology_enrichment_disease=DOID:0060100!3.15e-09!3;DOID:4045!3.15e-09!3 | |ontology_enrichment_disease=DOID:0060100!3.15e-09!3;DOID:4045!3.15e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.32e-23,3;DOID:4045,9.32e-23,3;DOID:0050686,1.04e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.20e-09!46;UBERON:0002193!2.55e-07!48;UBERON:0002390!8.64e-07!45;UBERON:0003061!8.64e-07!45 | |ontology_enrichment_uberon=UBERON:0002384!1.20e-09!46;UBERON:0002193!2.55e-07!48;UBERON:0002390!8.64e-07!45;UBERON:0003061!8.64e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.41e-08,9;UBERON:0002036,5.41e-08,9;UBERON:0002385,5.41e-08,9;UBERON:0000486,5.41e-08,9;UBERON:0007503,5.41e-08,9;UBERON:0001015,5.41e-08,9;UBERON:0002329,5.41e-08,9;UBERON:0003082,5.41e-08,9;UBERON:0003059,5.41e-08,9;UBERON:0007282,5.41e-08,9;UBERON:0004290,5.41e-08,9;UBERON:0009618,5.41e-08,9;UBERON:0002204,5.42e-08,32;UBERON:0000383,3.03e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.40788722151667,0.70219357896598,0,0,1.36960583944965,0,0.333109761815663,0,0,0.946386496074713,1.50825876966313,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.1253413780952,1.0470474879476,11.7646297606203,9.56263678941824,2.91306211818692,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.979660166265606,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.40788722151667,0.70219357896598,0,0,1.36960583944965,0,0.333109761815663,0,0,0.946386496074713,1.50825876966313,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.1253413780952,1.0470474879476,11.7646297606203,9.56263678941824,2.91306211818692,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.979660166265606,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr1:53830966..53830975,- | |short_description=p@chr1:53830966..53830975,- | ||
}} | }} |
Latest revision as of 18:15, 5 August 2015
Short description: | p@chr1:53830966..53830975, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:53830966..53830975, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.24e-08 | 1 |
multi-potent skeletal muscle stem cell | 5.41e-08 | 9 |
hematopoietic cell | 6.89e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.89e-08 | 32 |
hematopoietic stem cell | 6.89e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.89e-08 | 32 |
mature alpha-beta T cell | 8.37e-08 | 9 |
alpha-beta T cell | 8.37e-08 | 9 |
immature T cell | 8.37e-08 | 9 |
mature T cell | 8.37e-08 | 9 |
immature alpha-beta T cell | 8.37e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 2.86e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.41e-08 | 9 |
striated muscle tissue | 5.41e-08 | 9 |
muscle tissue | 5.41e-08 | 9 |
multilaminar epithelium | 5.41e-08 | 9 |
epithelial vesicle | 5.41e-08 | 9 |
musculature | 5.41e-08 | 9 |
somite | 5.41e-08 | 9 |
myotome | 5.41e-08 | 9 |
presomitic mesoderm | 5.41e-08 | 9 |
presumptive segmental plate | 5.41e-08 | 9 |
dermomyotome | 5.41e-08 | 9 |
trunk paraxial mesoderm | 5.41e-08 | 9 |
musculoskeletal system | 5.42e-08 | 32 |
musculature of body | 3.03e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.32e-23 | 3 |
muscle cancer | 9.32e-23 | 3 |
organ system cancer | 1.04e-11 | 6 |