FFCP PHASE1:Mm9::chr7:147170506..147170519,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:147170506..147170519,- | |||
|description=CAGE_peak_at_chr7:147170506..147170519,- | |description=CAGE_peak_at_chr7:147170506..147170519,- | ||
|id=chr7:147170506..147170519,- | |id=chr7:147170506..147170519,- | ||
|ontology_enrichment_celltype=CL:0000049!4.78e-09!19;CL:0000557!6.28e-09!7 | |ontology_enrichment_celltype=CL:0000049!4.78e-09!19;CL:0000557!6.28e-09!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.59e-12,19;CL:0000557,3.08e-09,7;CL:0000355,1.61e-07,9;CL:0000988,3.38e-07,32;CL:0002032,3.38e-07,32;CL:0000037,3.38e-07,32;CL:0000837,3.38e-07,32 | |||
|ontology_enrichment_disease=DOID:0060100!8.87e-09!3;DOID:4045!8.87e-09!3 | |ontology_enrichment_disease=DOID:0060100!8.87e-09!3;DOID:4045!8.87e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.08e-21,3;DOID:4045,2.08e-21,3;DOID:0050686,5.11e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.24e-08!32;UBERON:0003975!2.86e-07!5 | |ontology_enrichment_uberon=UBERON:0002204!1.24e-08!32;UBERON:0003975!2.86e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.74e-10,32;UBERON:0001134,1.61e-07,9;UBERON:0002036,1.61e-07,9;UBERON:0002385,1.61e-07,9;UBERON:0000486,1.61e-07,9;UBERON:0007503,1.61e-07,9;UBERON:0001015,1.61e-07,9;UBERON:0002329,1.61e-07,9;UBERON:0003082,1.61e-07,9;UBERON:0003059,1.61e-07,9;UBERON:0007282,1.61e-07,9;UBERON:0004290,1.61e-07,9;UBERON:0009618,1.61e-07,9;UBERON:0002371,6.30e-07,16;UBERON:0000383,8.12e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.59756818148,19.533383613095,14.1351410872926,283.527577230949,101.773777258808,43.6959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.67741174308288,4.19931911695385,4.44745794755726,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,9.00717674901503,7.95657798307659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.339956859987711,0.979660166265606,0.690999869022119,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.59756818148,19.533383613095,14.1351410872926,283.527577230949,101.773777258808,43.6959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.67741174308288,4.19931911695385,4.44745794755726,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,9.00717674901503,7.95657798307659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.339956859987711,0.979660166265606,0.690999869022119,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr7:147170506..147170519,- | |short_description=p@chr7:147170506..147170519,- | ||
}} | }} |
Latest revision as of 11:18, 4 August 2015
Short description: | p@chr7:147170506..147170519, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:147170506..147170519, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.59e-12 | 19 |
granulocyte monocyte progenitor cell | 3.08e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.61e-07 | 9 |
hematopoietic cell | 3.38e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.38e-07 | 32 |
hematopoietic stem cell | 3.38e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.38e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.74e-10 | 32 |
skeletal muscle tissue | 1.61e-07 | 9 |
striated muscle tissue | 1.61e-07 | 9 |
muscle tissue | 1.61e-07 | 9 |
multilaminar epithelium | 1.61e-07 | 9 |
epithelial vesicle | 1.61e-07 | 9 |
musculature | 1.61e-07 | 9 |
somite | 1.61e-07 | 9 |
myotome | 1.61e-07 | 9 |
presomitic mesoderm | 1.61e-07 | 9 |
presumptive segmental plate | 1.61e-07 | 9 |
dermomyotome | 1.61e-07 | 9 |
trunk paraxial mesoderm | 1.61e-07 | 9 |
bone marrow | 6.30e-07 | 16 |
musculature of body | 8.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.08e-21 | 3 |
muscle cancer | 2.08e-21 | 3 |
organ system cancer | 5.11e-11 | 6 |