FFCP PHASE1:Hg19::chr2:228579305..228579342,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:228579305..228579342,-
|short_description=p3@SLC19A3
|description=CAGE_peak_3_at_SLC19A3_5end
|association_with_transcript=0bp_to_ENST00000456524_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80704 | |EntrezGene=80704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16266 | |HGNC=16266 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZI1 | |UniProt=C9IZI1 | ||
|association_with_transcript=0bp_to_ENST00000456524_5end | |||
|cluster_id=chr2:228579305..228579342,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_SLC19A3_5end | |||
|id=chr2:228579305..228579342,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.99e-25;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.27e-22,15 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.98e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002079;6.98e-21;1!UBERON:0002135;6.98e-21;1!UBERON:0002081;3.89e-11;2!UBERON:0002133;3.89e-11;2!UBERON:0003978;7.50e-08;3!UBERON:0004151;7.50e-08;3!UBERON:0000946;7.50e-08;3 | |||
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| ||
|short_description=p3@SLC19A3 | |||
}} | }} |
Latest revision as of 04:13, 25 September 2015
Short description: | p3@SLC19A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC19A3_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000456524_5end |
EntrezGene: | SLC19A3 |
HGNC: | 16266 |
UniProt: | C9IZI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.27e-22 | 15 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 5.16e-21 | 1 |
mitral valve | 9.43e-21 | 1 |
cardiac atrium | 3.35e-11 | 2 |
future cardiac atrium | 3.35e-11 | 2 |
atrioventricular valve | 4.52e-11 | 2 |
cardiac chamber | 6.78e-08 | 3 |
valve | 8.29e-08 | 3 |
cardiac mesenchyme | 8.29e-08 | 3 |
cardial valve | 8.29e-08 | 3 |
tunica intima | 8.29e-08 | 3 |
heart layer | 8.29e-08 | 3 |
endocardium | 8.29e-08 | 3 |
endocardial cushion | 8.29e-08 | 3 |
presumptive endocardium | 8.29e-08 | 3 |