FFCP PHASE1:Hg19::chr2:231084639..231084654,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:231084639..231084654,-
|short_description=p2@SP110
|description=CAGE_peak_2_at_SP110_5end
|association_with_transcript=10bp_to_ENST00000258381_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3431 | |EntrezGene=3431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5401 | |HGNC=5401 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000258381_5end | |||
|cluster_id=chr2:231084639..231084654,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_SP110_5end | |||
|id=chr2:231084639..231084654,- | |||
|ontology_enrichment_celltype=CL:0002057!3.22e-21!42;CL:0000860!1.51e-18!45;CL:0000766!6.45e-18!76;CL:0000738!3.21e-16!140;CL:0002087!4.58e-16!119;CL:0002194!8.86e-16!63;CL:0000576!8.86e-16!63;CL:0000040!8.86e-16!63;CL:0000559!8.86e-16!63;CL:0002009!3.26e-14!65;CL:0000839!3.35e-13!70;CL:0000557!1.55e-12!71;CL:0002031!1.83e-12!124;CL:0000037!5.76e-10!172;CL:0000566!5.76e-10!172;CL:0002032!2.83e-09!165;CL:0000837!2.83e-09!165;CL:0000988!4.63e-08!182;CL:0000763!1.85e-07!112;CL:0000049!1.85e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-21;33!CL:0002057;3.93e-21;33!CL:0000473;5.06e-18;39!CL:0000234;5.06e-18;39!CL:0000576;5.76e-16;48!CL:0000766;2.44e-12;69!CL:0002087;3.55e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.81e-26,48;CL:0000234,2.81e-26,48;CL:0000860,3.77e-26,42;CL:0002057,3.77e-26,42;CL:0000766,2.75e-25,72;CL:0002194,1.17e-21,59;CL:0000576,1.17e-21,59;CL:0000040,1.17e-21,59;CL:0000559,1.17e-21,59;CL:0000738,2.05e-21,136;CL:0002009,2.80e-20,61;CL:0000839,1.12e-19,66;CL:0002087,3.06e-19,115;CL:0000557,4.48e-19,67;CL:0002031,2.04e-16,120;CL:0000037,7.63e-14,168;CL:0002032,1.06e-12,161;CL:0000837,1.06e-12,161;CL:0000988,4.14e-12,177;CL:0000763,5.44e-12,108;CL:0000049,5.44e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.56e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.34e-16!112;UBERON:0002390!2.14e-14!102;UBERON:0003061!2.14e-14!102;UBERON:0002371!8.54e-10!80;UBERON:0007023!2.65e-09!115;UBERON:0001474!5.57e-09!86;UBERON:0002405!1.66e-08!115;UBERON:0004765!2.38e-07!101;UBERON:0001434!2.38e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.59e-22,108;UBERON:0002390,1.26e-21,98;UBERON:0003061,1.26e-21,98;UBERON:0002405,3.06e-17,93;UBERON:0002371,5.56e-15,76;UBERON:0001474,1.06e-13,82;UBERON:0004765,3.64e-13,90;UBERON:0001434,6.23e-10,100;UBERON:0003081,6.68e-10,203;UBERON:0007023,5.22e-07,114 | |||
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| ||
|short_description=p2@SP110 | |||
}} | }} |
Latest revision as of 06:15, 25 September 2015
Short description: | p2@SP110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SP110_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 10bp_to_ENST00000258381_5end |
EntrezGene: | SP110 |
HGNC: | 5401 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.81e-26 | 48 |
phagocyte | 2.81e-26 | 48 |
classical monocyte | 3.77e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.77e-26 | 42 |
myeloid leukocyte | 2.75e-25 | 72 |
monopoietic cell | 1.17e-21 | 59 |
monocyte | 1.17e-21 | 59 |
monoblast | 1.17e-21 | 59 |
promonocyte | 1.17e-21 | 59 |
leukocyte | 2.05e-21 | 136 |
macrophage dendritic cell progenitor | 2.80e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.12e-19 | 66 |
nongranular leukocyte | 3.06e-19 | 115 |
granulocyte monocyte progenitor cell | 4.48e-19 | 67 |
hematopoietic lineage restricted progenitor cell | 2.04e-16 | 120 |
hematopoietic stem cell | 7.63e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.06e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-12 | 161 |
hematopoietic cell | 4.14e-12 | 177 |
myeloid cell | 5.44e-12 | 108 |
common myeloid progenitor | 5.44e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.59e-22 | 108 |
hematopoietic system | 1.26e-21 | 98 |
blood island | 1.26e-21 | 98 |
immune system | 3.06e-17 | 93 |
bone marrow | 5.56e-15 | 76 |
bone element | 1.06e-13 | 82 |
skeletal element | 3.64e-13 | 90 |
skeletal system | 6.23e-10 | 100 |
lateral plate mesoderm | 6.68e-10 | 203 |
adult organism | 5.22e-07 | 114 |