FFCP PHASE1:Hg19::chr2:233404429..233404447,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:233404429..233404447,+
|short_description=p1@CHRNG
|description=CAGE_peak_1_at_CHRNG_5end
|association_with_transcript=0bp_to_ENST00000389494,ENST000004850...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1146 | |EntrezGene=1146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1967 | |HGNC=1967 | ||
|TSSclassifier=strong | |||
|UniProt=P07510,Q14DU4 | |UniProt=P07510,Q14DU4 | ||
|association_with_transcript=0bp_to_ENST00000389494,ENST00000485094,ENST00000541596,NM_005199,uc002vsx.1,uc010fyd.2,uc010fye.1_5end | |||
|cluster_id=chr2:233404429..233404447,+ | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_1_at_CHRNG_5end | |||
|id=chr2:233404429..233404447,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.77e-24!9;CL:0000594!5.69e-11!3;CL:0002575!3.95e-08!2;CL:0000515!1.25e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.95e-38;9!CL:0000594;1.79e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.64e-38,9;CL:0000594,1.62e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.21e-08;1!UBERON:0004874;2.21e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.01e-10!61;UBERON:0002036!1.01e-10!61;UBERON:0003082!1.01e-10!61;UBERON:0002385!2.92e-10!63;UBERON:0001015!2.92e-10!63;UBERON:0000383!2.92e-10!63;UBERON:0004290!7.34e-09!70;UBERON:0001630!1.75e-08!2;UBERON:0005090!1.75e-08!2;UBERON:0000341!2.25e-08!2;UBERON:0000914!6.27e-08!83;UBERON:0002329!6.27e-08!83;UBERON:0003077!6.27e-08!83;UBERON:0003059!6.27e-08!83;UBERON:0007282!6.27e-08!83;UBERON:0009618!6.27e-08!83;UBERON:0007285!6.27e-08!83;UBERON:0003127!1.22e-07!2;UBERON:0000007!1.83e-07!2;UBERON:0000486!4.88e-07!82 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.94e-16,2;UBERON:0001630,6.94e-16,2;UBERON:0000341,1.16e-15,2;UBERON:0001134,2.99e-12,62;UBERON:0002036,2.99e-12,62;UBERON:0003082,2.99e-12,62;UBERON:0002385,8.29e-12,64;UBERON:0001015,8.29e-12,64;UBERON:0000383,8.29e-12,64;UBERON:0002329,1.88e-10,71;UBERON:0003059,1.88e-10,71;UBERON:0007282,1.88e-10,71;UBERON:0004290,1.88e-10,71;UBERON:0009618,1.88e-10,71;UBERON:0003077,2.79e-10,72;UBERON:0007285,2.79e-10,72;UBERON:0007524,4.10e-10,73;UBERON:0007503,2.42e-09,78;UBERON:0005256,5.52e-09,122;UBERON:0005418,8.15e-09,1;UBERON:0001389,8.15e-09,1;UBERON:0000026,8.15e-09,1;UBERON:0008784,8.15e-09,1;UBERON:0006058,8.15e-09,1;UBERON:0003663,8.15e-09,1;UBERON:0004256,8.15e-09,1;UBERON:0004708,8.15e-09,1;UBERON:0002101,8.15e-09,1;UBERON:0004709,8.15e-09,1;UBERON:0002529,8.15e-09,1;UBERON:0010538,8.15e-09,1;UBERON:0003661,8.15e-09,1;UBERON:0010890,8.15e-09,1;UBERON:0002471,8.15e-09,1;UBERON:0001383,8.15e-09,1;UBERON:0004357,8.15e-09,1;UBERON:0004347,8.15e-09,1;UBERON:0005420,8.15e-09,1;UBERON:0005732,8.15e-09,1;UBERON:0010758,8.15e-09,1;UBERON:0010707,8.15e-09,1;UBERON:0000978,8.15e-09,1;UBERON:0002103,8.15e-09,1;UBERON:0001665,8.15e-09,1;UBERON:0003823,8.15e-09,1;UBERON:0000154,8.15e-09,1;UBERON:0010709,8.15e-09,1;UBERON:0005733,8.15e-09,1;UBERON:0005730,8.15e-09,1;UBERON:0002426,8.78e-09,1;UBERON:0003831,8.78e-09,1;UBERON:0003898,8.78e-09,1;UBERON:0004830,8.78e-09,1;UBERON:0003830,8.78e-09,1;UBERON:0005175,8.78e-09,1;UBERON:0001774,8.78e-09,1;UBERON:0001103,8.78e-09,1;UBERON:0010084,8.78e-09,1;UBERON:0007029,9.46e-09,1;UBERON:0000486,1.15e-08,83;UBERON:0001301,1.59e-08,1;UBERON:0000989,1.84e-08,1;UBERON:0008811,1.84e-08,1;UBERON:0006258,1.84e-08,1;UBERON:0005876,1.84e-08,1;UBERON:0004874,1.84e-08,1 | |||
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| ||
|short_description=p1@CHRNG | |||
}} | }} |
Latest revision as of 21:50, 15 September 2015
Short description: | p1@CHRNG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHRNG_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 0bp_to_ENST00000389494, ENST00000485094, ENST00000541596, NM_005199, uc002vsx.1, uc010fyd.2, uc010fye.1_5end |
EntrezGene: | CHRNG |
HGNC: | 1967 |
UniProt: | P07510Q14DU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.64e-38 | 9 |
skeletal muscle satellite cell | 1.62e-10 | 3 |