FFCP PHASE1:Mm9::chr13:109906519..109906528,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238871 | |EntrezGene=238871 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |MCL_coexpression_id=30 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENSMUST00000138938_5end | |association_with_transcript=-24bp_to_ENSMUST00000138938_5end | ||
|cluster_id=chr13:109906519..109906528,+ | |||
|description=CAGE_peak_81_at_Pde4d_5end | |description=CAGE_peak_81_at_Pde4d_5end | ||
|id=chr13:109906519..109906528,+ | |id=chr13:109906519..109906528,+ | ||
|ontology_enrichment_celltype=CL:0002614!4.17e-07!3 | |ontology_enrichment_celltype=CL:0002614!4.17e-07!3 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.86e-19!50;UBERON:0006238!4.86e-19!50;UBERON:0002616!9.30e-17!49;UBERON:0001049!1.02e-15!52;UBERON:0005068!1.02e-15!52;UBERON:0006241!1.02e-15!52;UBERON:0007135!1.02e-15!52;UBERON:0000033!1.22e-14!63;UBERON:0001017!3.30e-14!73;UBERON:0005743!3.30e-14!73;UBERON:0000073!9.16e-14!75;UBERON:0001016!9.16e-14!75;UBERON:0002298!2.56e-12!6;UBERON:0002346!6.40e-11!71;UBERON:0003075!6.40e-11!71;UBERON:0007284!6.40e-11!71;UBERON:0002950!8.24e-11!4;UBERON:0001891!8.24e-11!4;UBERON:0009616!8.24e-11!4;UBERON:0003080!2.57e-10!40;UBERON:0007811!4.31e-10!86;UBERON:0004121!1.84e-09!102;UBERON:0000924!1.84e-09!102;UBERON:0006601!1.84e-09!102;UBERON:0000153!4.99e-09!94;UBERON:0002780!1.25e-08!39;UBERON:0001890!1.25e-08!39;UBERON:0006240!1.25e-08!39;UBERON:0003056!3.77e-08!49;UBERON:0004733!6.78e-08!6;UBERON:0004732!6.78e-08!6;UBERON:0002028!6.78e-08!6;UBERON:0007277!6.78e-08!6;UBERON:0002791!2.33e-07!29;UBERON:0003528!2.33e-07!29;UBERON:0001893!2.33e-07!29;UBERON:0002038!4.17e-07!3;UBERON:0002308!4.17e-07!3;UBERON:0009663!4.17e-07!3;UBERON:0009661!4.17e-07!3;UBERON:0006331!4.17e-07!3;UBERON:0000125!4.17e-07!3 | |ontology_enrichment_uberon=UBERON:0000955!4.86e-19!50;UBERON:0006238!4.86e-19!50;UBERON:0002616!9.30e-17!49;UBERON:0001049!1.02e-15!52;UBERON:0005068!1.02e-15!52;UBERON:0006241!1.02e-15!52;UBERON:0007135!1.02e-15!52;UBERON:0000033!1.22e-14!63;UBERON:0001017!3.30e-14!73;UBERON:0005743!3.30e-14!73;UBERON:0000073!9.16e-14!75;UBERON:0001016!9.16e-14!75;UBERON:0002298!2.56e-12!6;UBERON:0002346!6.40e-11!71;UBERON:0003075!6.40e-11!71;UBERON:0007284!6.40e-11!71;UBERON:0002950!8.24e-11!4;UBERON:0001891!8.24e-11!4;UBERON:0009616!8.24e-11!4;UBERON:0003080!2.57e-10!40;UBERON:0007811!4.31e-10!86;UBERON:0004121!1.84e-09!102;UBERON:0000924!1.84e-09!102;UBERON:0006601!1.84e-09!102;UBERON:0000153!4.99e-09!94;UBERON:0002780!1.25e-08!39;UBERON:0001890!1.25e-08!39;UBERON:0006240!1.25e-08!39;UBERON:0003056!3.77e-08!49;UBERON:0004733!6.78e-08!6;UBERON:0004732!6.78e-08!6;UBERON:0002028!6.78e-08!6;UBERON:0007277!6.78e-08!6;UBERON:0002791!2.33e-07!29;UBERON:0003528!2.33e-07!29;UBERON:0001893!2.33e-07!29;UBERON:0002038!4.17e-07!3;UBERON:0002308!4.17e-07!3;UBERON:0009663!4.17e-07!3;UBERON:0009661!4.17e-07!3;UBERON:0006331!4.17e-07!3;UBERON:0000125!4.17e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,5.23616767033638,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,5.23616767033638,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p81@Pde4d | |short_description=p81@Pde4d | ||
}} | }} |
Latest revision as of 02:20, 27 September 2015
Short description: | p81@Pde4d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_81_at_Pde4d_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -24bp_to_ENSMUST00000138938_5end |
EntrezGene: | Pde4d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.63e-30 | 4 |
regional part of metencephalon | 5.63e-30 | 4 |
metencephalon | 5.63e-30 | 4 |
future metencephalon | 5.63e-30 | 4 |
rhombic lip | 5.63e-30 | 4 |
segmental subdivision of hindbrain | 1.98e-20 | 6 |
segmental subdivision of nervous system | 1.98e-20 | 6 |
hindbrain | 1.98e-20 | 6 |
presumptive hindbrain | 1.98e-20 | 6 |
posterior neural tube | 8.07e-11 | 12 |
chordal neural plate | 8.07e-11 | 12 |