FFCP PHASE1:Mm9::chr1:39424661..39424693,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100042740,100505081,114641,638399,665533,665562,667682 | |EntrezGene=100042740,100505081,114641,638399,665533,665562,667682 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=642 | |MCL_coexpression_id=642 | ||
|TSSclassifier=NA | |||
|UniProt=P62900,Q5M9K9,D3YWP7 | |UniProt=P62900,Q5M9K9,D3YWP7 | ||
|association_with_transcript=-2bp_to_ENSMUST00000086535,NM_001252218,NM_001252219,NM_053257,uc007ate.2,uc007atf.2_5end | |association_with_transcript=-2bp_to_ENSMUST00000086535,NM_001252218,NM_001252219,NM_053257,uc007ate.2,uc007atf.2_5end | ||
|cluster_id=chr1:39424661..39424693,+ | |||
|description=CAGE_peak_2_at_Gm10191_5end,CAGE_peak_2_at_Gm13004_5end,CAGE_peak_2_at_Gm7689_5end,CAGE_peak_2_at_Gm8759_5end,CAGE_peak_2_at_LOC100505081_5end,CAGE_peak_2_at_LOC638399_5end,CAGE_peak_2_at_Rpl31_5end | |description=CAGE_peak_2_at_Gm10191_5end,CAGE_peak_2_at_Gm13004_5end,CAGE_peak_2_at_Gm7689_5end,CAGE_peak_2_at_Gm8759_5end,CAGE_peak_2_at_LOC100505081_5end,CAGE_peak_2_at_LOC638399_5end,CAGE_peak_2_at_Rpl31_5end | ||
|id=chr1:39424661..39424693,+ | |id=chr1:39424661..39424693,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.12104192973356,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,2.01455126294268,3.03696432774183,0.516493293766305,0.84473233291,0.70219357896598,5.13653904676515,6.1424562426409,0.513602189793617,0.524522414513984,11.3257319017325,8.70643649776252,12.5921138063066,1.89277299214943,1.09691546884591,2.97072756258621,0.850432901510698,3.07801948722744,6.26879493933445,4.47978783821539,2.98232065387321,2.29692785646008,3.01533397311352,5.60225204983311,1.33016393619462,2.01624103807945,8.42575940490158,12.7006134691926,9.22597181376855,0,2.59966457776147,4.3221007793208,3.06254034393554,0.418531630736908,2.3440060335714,1.57057123192139,0.588231488031014,0.683045484958446,0.485510353031154,0.881277725829041,1.92616169317078,5.32285581268876,0,6.1047043786525,2.41654801007919,0.777719596297134,8.39918529752175,4.31257693094915,1.00669563634642,0,0,10.2903774414379,2.57880095944881,3.6097046459421,1.61853168687678,1.05798195854407,1.90149421051854,8.80995783379743,9.78224275722253,1.7997994345628,0.988866362566974,2.1314403448383,3.89480143673926,1.92109152660777,1.34796496001021,1.08004750665353,2.73422449756797,3.14216082844184,2.42955395046775,1.46988959057945,2.01275489138296,2.75765635983006,1.10115880999389,0.638436690425939,1.0752457327937,0.923204014111357,2.47016637726506,1.56274011167028,1.95428099300967,1.12552522006336,0.763991238884051,1.76777151284201,2.84743361598206,0.931997229126503,13.9336195733059,5.51672388779534,1.15945795480671,1.72084775396277,0.679971333707751,0,1.94932925234301,0,0.983110940922263,3.91989741929533,7.53379413348319,7.0667914902068,0.845060518660083,0,0,0,18.8347205679756,15.2015919285059,16.6823066854878,0.68510327831436,0.517875767294343,0.445326417194474,6.24547176358089,2.74018930480927,3.45923245884088,3.91878865436819,1.41106448562846,0.376999773989026,1.23597483867187,0.578397427679647,2.65383165584962,2.26473589926373,1.98757366614354,3.39412677194655,0,0.292780797011547,0.41889341362691,2.29911349687732,5.03223522924865,10.1983464268879,5.71816021828791,0.599162557619291,3.20250421973039,2.01046963380583,0.869121600961382,2.55715457330331,1.0389402227978,1.1356888414743,1.2220723662038,1.7416975885413,1.51633655060205,0.631325567659422,2.73252930221678,2.5289231487682,1.44049703844279,1.35634336052144,0.884474488967262,0.512454881139399,0.468508622798644,0.258703370739016,3.44908788692548,1.89106080167819,1.75951124163949,5.04150184583422,0.556094498451196,1.74126083261083,2.26360350048738,6.17006227137329,12.6398373716382,11.8380037272769,5.11494298912067,4.34964122324554,3.75241695969754,2.16074473753218,0.946978942340841,1.57411385397923,1.3884040159864,0.930135779001631,1.3413670069981,1.28441876603886,0.822799249567402,0.820837320395476,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,1.26173969138476,1.13195073617213,0.330418782983798,1.85115396664481,3.19932375802851,2.78684006232526,3.8660238396628,3.02525286935014,1.77902435075896,1.90225626112559,2.37264530772256,0.823494773620054,2.01068167040216,0.596869416123452,1.36474860983384,1.79763881730844,0.648414149624083,0.597423819763102,6.82804443431094,2.51346727741403,0,1.22190796707189,0.775809948670503,1.26244475802573,0.69560190836683,0.590440591918409,0.156998727841375,0.246794327843601,0,11.8460025058427,17.4937505650751,13.0420025183215,6.49152388443209,6.51178331331525,4.32863948028414,3.45235364940973,2.59416362840057,5.49122826376163,0,2.23284568601102,2.18426371180192,0.252578877947112,1.25578189465339,0.964887042726734,0.739012760666419,6.06372517665551,3.7481944581666,2.8856664581782,1.64283173801951,1.00503754465089,1.19021820443007,0.780534591431195,0.788175720530955,0.221464689648775,0.478364305972461,0.163863314715738,0.518054945597687,0,3.01582567878545,1.08781136763742,5.4094070032094,1.37968373152366,1.9266070798535,0.937693492737625,11.3115112309906,0,10.0962630213202,8.98009111882268,1.07711698866399,0.955875191810208,1.33679204449436,1.69845918473299,13.7635638569464,17.82760733259,8.30104333687699,1.28528526568723,0.709700426041343,3.73937767701236,2.11753047159649,0.494910368917606,0,5.34117399540959,7.25576536715402,5.65815239267694,2.36241514304618,2.15204603560749,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,1.02131881726136,2.52085531643834,2.45781499187234,1.07168517515796,0.532020700926821,0.535106452806212,0.658196082408484,0.608929898229199,7.97883807416615,1.48282449604674,0.220528398054962,1.31909002353184,1.77610869365496,1.62844897306021,2.50681922406587,2.79039529566604,0,0.927126510052548,4.27177201994632,4.33412422722767,6.66700298530962,8.4765805652111,6.83471138605126,3.43167259809784,2.20971958992012,2.51912614182584,2.21119958087078,0.954670618015114,5.06137589729817,3.04979200690273,2.37611749807963,2.92723614420256,1.09181281873089,2.15782954215713,1.32245529160537,0.523511883968059,0.648074866458964,1.24267862617385,2.25477175473676,6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| |phase1_expression=1.12104192973356,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,2.01455126294268,3.03696432774183,0.516493293766305,0.84473233291,0.70219357896598,5.13653904676515,6.1424562426409,0.513602189793617,0.524522414513984,11.3257319017325,8.70643649776252,12.5921138063066,1.89277299214943,1.09691546884591,2.97072756258621,0.850432901510698,3.07801948722744,6.26879493933445,4.47978783821539,2.98232065387321,2.29692785646008,3.01533397311352,5.60225204983311,1.33016393619462,2.01624103807945,8.42575940490158,12.7006134691926,9.22597181376855,0,2.59966457776147,4.3221007793208,3.06254034393554,0.418531630736908,2.3440060335714,1.57057123192139,0.588231488031014,0.683045484958446,0.485510353031154,0.881277725829041,1.92616169317078,5.32285581268876,0,6.1047043786525,2.41654801007919,0.777719596297134,8.39918529752175,4.31257693094915,1.00669563634642,0,0,10.2903774414379,2.57880095944881,3.6097046459421,1.61853168687678,1.05798195854407,1.90149421051854,8.80995783379743,9.78224275722253,1.7997994345628,0.988866362566974,2.1314403448383,3.89480143673926,1.92109152660777,1.34796496001021,1.08004750665353,2.73422449756797,3.14216082844184,2.42955395046775,1.46988959057945,2.01275489138296,2.75765635983006,1.10115880999389,0.638436690425939,1.0752457327937,0.923204014111357,2.47016637726506,1.56274011167028,1.95428099300967,1.12552522006336,0.763991238884051,1.76777151284201,2.84743361598206,0.931997229126503,13.9336195733059,5.51672388779534,1.15945795480671,1.72084775396277,0.679971333707751,0,1.94932925234301,0,0.983110940922263,3.91989741929533,7.53379413348319,7.0667914902068,0.845060518660083,0,0,0,18.8347205679756,15.2015919285059,16.6823066854878,0.68510327831436,0.517875767294343,0.445326417194474,6.24547176358089,2.74018930480927,3.45923245884088,3.91878865436819,1.41106448562846,0.376999773989026,1.23597483867187,0.578397427679647,2.65383165584962,2.26473589926373,1.98757366614354,3.39412677194655,0,0.292780797011547,0.41889341362691,2.29911349687732,5.03223522924865,10.1983464268879,5.71816021828791,0.599162557619291,3.20250421973039,2.01046963380583,0.869121600961382,2.55715457330331,1.0389402227978,1.1356888414743,1.2220723662038,1.7416975885413,1.51633655060205,0.631325567659422,2.73252930221678,2.5289231487682,1.44049703844279,1.35634336052144,0.884474488967262,0.512454881139399,0.468508622798644,0.258703370739016,3.44908788692548,1.89106080167819,1.75951124163949,5.04150184583422,0.556094498451196,1.74126083261083,2.26360350048738,6.17006227137329,12.6398373716382,11.8380037272769,5.11494298912067,4.34964122324554,3.75241695969754,2.16074473753218,0.946978942340841,1.57411385397923,1.3884040159864,0.930135779001631,1.3413670069981,1.28441876603886,0.822799249567402,0.820837320395476,0.324275238183423,0.146199987425332,0.658650345873152,0.134206418760372,1.26173969138476,1.13195073617213,0.330418782983798,1.85115396664481,3.19932375802851,2.78684006232526,3.8660238396628,3.02525286935014,1.77902435075896,1.90225626112559,2.37264530772256,0.823494773620054,2.01068167040216,0.596869416123452,1.36474860983384,1.79763881730844,0.648414149624083,0.597423819763102,6.82804443431094,2.51346727741403,0,1.22190796707189,0.775809948670503,1.26244475802573,0.69560190836683,0.590440591918409,0.156998727841375,0.246794327843601,0,11.8460025058427,17.4937505650751,13.0420025183215,6.49152388443209,6.51178331331525,4.32863948028414,3.45235364940973,2.59416362840057,5.49122826376163,0,2.23284568601102,2.18426371180192,0.252578877947112,1.25578189465339,0.964887042726734,0.739012760666419,6.06372517665551,3.7481944581666,2.8856664581782,1.64283173801951,1.00503754465089,1.19021820443007,0.780534591431195,0.788175720530955,0.221464689648775,0.478364305972461,0.163863314715738,0.518054945597687,0,3.01582567878545,1.08781136763742,5.4094070032094,1.37968373152366,1.9266070798535,0.937693492737625,11.3115112309906,0,10.0962630213202,8.98009111882268,1.07711698866399,0.955875191810208,1.33679204449436,1.69845918473299,13.7635638569464,17.82760733259,8.30104333687699,1.28528526568723,0.709700426041343,3.73937767701236,2.11753047159649,0.494910368917606,0,5.34117399540959,7.25576536715402,5.65815239267694,2.36241514304618,2.15204603560749,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,1.02131881726136,2.52085531643834,2.45781499187234,1.07168517515796,0.532020700926821,0.535106452806212,0.658196082408484,0.608929898229199,7.97883807416615,1.48282449604674,0.220528398054962,1.31909002353184,1.77610869365496,1.62844897306021,2.50681922406587,2.79039529566604,0,0.927126510052548,4.27177201994632,4.33412422722767,6.66700298530962,8.4765805652111,6.83471138605126,3.43167259809784,2.20971958992012,2.51912614182584,2.21119958087078,0.954670618015114,5.06137589729817,3.04979200690273,2.37611749807963,2.92723614420256,1.09181281873089,2.15782954215713,1.32245529160537,0.523511883968059,0.648074866458964,1.24267862617385,2.25477175473676,6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| ||
|short_description=p2@Gm10191,p2@Gm13004,p2@Gm7689,p2@Gm8759,p2@LOC100505081,p2@LOC638399,p2@Rpl31 | |short_description=p2@Gm10191,p2@Gm13004,p2@Gm7689,p2@Gm8759,p2@LOC100505081,p2@LOC638399,p2@Rpl31 | ||
}} | }} |
Latest revision as of 03:03, 27 September 2015
Short description: | p2@Gm10191, p2@Gm13004, p2@Gm7689, p2@Gm8759, p2@LOC100505081, p2@LOC638399, p2@Rpl31 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm10191_5end, CAGE_peak_2_at_Gm13004_5end, CAGE_peak_2_at_Gm7689_5end, CAGE_peak_2_at_Gm8759_5end, CAGE_peak_2_at_LOC100505081_5end, CAGE_peak_2_at_LOC638399_5end, CAGE_peak_2_at_Rpl31_5end |
Coexpression cluster: | MCL_coexpression_mm9:642 |
Association with transcript: | -2bp_to_ENSMUST00000086535, NM_001252218, NM_001252219, NM_053257, uc007ate.2, uc007atf.2_5end |
EntrezGene: | 100042740,100505081,114641,638399,665533,665562,667682 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data