FFCP PHASE1:Hg19::chr2:63815351..63815403,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:63815351..63815403,-
|short_description=p1@WDPCP
|description=CAGE_peak_1_at_WDPCP_5end
|association_with_transcript=0bp_to_ENST00000418148_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51057 | |EntrezGene=51057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28027 | |HGNC=28027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000418148_5end | |||
|cluster_id=chr2:63815351..63815403,- | |||
|description=CAGE_peak_1_at_WDPCP_5end | |||
|id=chr2:63815351..63815403,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.74e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.08e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.67e-22!115;UBERON:0001049!4.91e-18!57;UBERON:0005068!4.91e-18!57;UBERON:0006241!4.91e-18!57;UBERON:0007135!4.91e-18!57;UBERON:0001017!2.38e-17!82;UBERON:0002780!4.90e-17!41;UBERON:0001890!4.90e-17!41;UBERON:0006240!4.90e-17!41;UBERON:0000955!8.02e-17!69;UBERON:0006238!8.02e-17!69;UBERON:0002616!5.37e-16!59;UBERON:0003080!7.76e-16!42;UBERON:0005743!1.56e-15!86;UBERON:0000073!1.03e-14!94;UBERON:0001016!1.03e-14!94;UBERON:0001893!2.39e-13!34;UBERON:0002020!3.84e-13!34;UBERON:0003528!3.84e-13!34;UBERON:0002791!1.01e-12!33;UBERON:0001869!1.26e-12!32;UBERON:0001950!4.46e-12!20;UBERON:0002619!1.19e-11!22;UBERON:0002346!4.44e-09!90;UBERON:0003075!8.90e-09!86;UBERON:0007284!8.90e-09!86;UBERON:0000956!9.77e-09!25;UBERON:0000203!9.77e-09!25;UBERON:0000153!2.08e-07!129;UBERON:0007811!2.08e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.27e-13;41!UBERON:0001890;3.27e-13;41!UBERON:0001950;3.47e-13;20!UBERON:0001893;1.53e-12;34!UBERON:0002619;1.80e-12;22!UBERON:0001869;4.00e-12;32!UBERON:0003528;5.66e-12;34!UBERON:0002020;5.66e-12;34!UBERON:0002791;9.75e-12;32!UBERON:0000073;1.33e-11;53!UBERON:0002616;1.33e-11;53!UBERON:0001017;9.87e-10;75!UBERON:0000956;1.91e-09;25!UBERON:0000203;1.91e-09;25!UBERON:0000955;1.74e-08;68!UBERON:0001016;3.50e-08;83!UBERON:0007023;3.56e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.22e-22,114;UBERON:0001049,1.11e-20,56;UBERON:0005068,1.11e-20,56;UBERON:0006241,1.11e-20,56;UBERON:0007135,1.11e-20,56;UBERON:0001017,2.11e-19,81;UBERON:0000073,2.65e-19,53;UBERON:0002616,2.65e-19,53;UBERON:0000955,1.16e-18,68;UBERON:0006238,1.16e-18,68;UBERON:0001016,2.73e-18,89;UBERON:0002780,7.03e-18,41;UBERON:0001890,7.03e-18,41;UBERON:0003080,7.03e-18,41;UBERON:0006240,7.03e-18,41;UBERON:0001893,5.69e-14,34;UBERON:0003528,9.39e-14,34;UBERON:0002020,9.39e-14,34;UBERON:0001869,3.33e-13,32;UBERON:0002791,8.85e-13,32;UBERON:0001950,1.02e-12,20;UBERON:0002619,5.32e-12,22;UBERON:0002346,1.78e-11,86;UBERON:0003075,3.63e-11,82;UBERON:0007284,3.63e-11,82;UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0003056,1.43e-08,61 | |||
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| ||
|short_description=p1@WDPCP | |||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p1@WDPCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDPCP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000418148_5end |
EntrezGene: | WDPCP |
HGNC: | 28027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.74e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.22e-22 | 114 |
neural tube | 1.11e-20 | 56 |
neural rod | 1.11e-20 | 56 |
future spinal cord | 1.11e-20 | 56 |
neural keel | 1.11e-20 | 56 |
central nervous system | 2.11e-19 | 81 |
regional part of nervous system | 2.65e-19 | 53 |
regional part of brain | 2.65e-19 | 53 |
brain | 1.16e-18 | 68 |
future brain | 1.16e-18 | 68 |
nervous system | 2.73e-18 | 89 |
regional part of forebrain | 7.03e-18 | 41 |
forebrain | 7.03e-18 | 41 |
anterior neural tube | 7.03e-18 | 41 |
future forebrain | 7.03e-18 | 41 |
telencephalon | 5.69e-14 | 34 |
brain grey matter | 9.39e-14 | 34 |
gray matter | 9.39e-14 | 34 |
cerebral hemisphere | 3.33e-13 | 32 |
regional part of telencephalon | 8.85e-13 | 32 |
neocortex | 1.02e-12 | 20 |
regional part of cerebral cortex | 5.32e-12 | 22 |
neurectoderm | 1.78e-11 | 86 |
neural plate | 3.63e-11 | 82 |
presumptive neural plate | 3.63e-11 | 82 |
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
pre-chordal neural plate | 1.43e-08 | 61 |