FFCP PHASE1:Hg19::chr2:95740679..95740695,+: Difference between revisions
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|id=chr2:95740679..95740695,+
|short_description=p@chr2:95740679..95740695,+
|description=CAGE_peak_at_chr2:95740679..95740695,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:95740679..95740695,+ | |||
|coexpression_cluster_id=C1225 | |||
|description=CAGE_peak_at_chr2:95740679..95740695,+ | |||
|id=chr2:95740679..95740695,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.79e-43!18;CL:0000789!6.79e-43!18;CL:0002420!6.79e-43!18;CL:0002419!6.79e-43!18;CL:0000790!6.79e-43!18;CL:0000084!1.62e-39!25;CL:0000827!1.62e-39!25;CL:0000624!1.64e-24!6;CL:0000838!2.15e-24!52;CL:0000542!7.59e-24!53;CL:0000051!7.59e-24!53;CL:0000625!9.18e-24!11;CL:0000898!3.83e-13!3;CL:0002087!1.27e-12!119;CL:0000623!1.61e-12!3;CL:0000825!1.61e-12!3;CL:0000738!5.89e-10!140;CL:0002031!1.30e-09!124;CL:0000815!1.89e-09!2;CL:0000792!1.89e-09!2;CL:0002677!1.89e-09!2;CL:0000037!3.54e-07!172;CL:0000566!3.54e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.97e-26;18!CL:0000789;6.97e-26;18!CL:0002419;6.97e-26;18!CL:0000084;4.21e-25;25!CL:0000625;2.19e-19;11!CL:0000624;1.10e-09;6!CL:0000815;7.27e-08;2!CL:0000792;7.27e-08;2!CL:0002677;7.27e-08;2!CL:0000542;4.17e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.13e-26,18;CL:0000789,7.13e-26,18;CL:0002420,7.13e-26,18;CL:0002419,7.13e-26,18;CL:0000790,7.13e-26,18;CL:0000084,4.88e-25,25;CL:0000827,4.88e-25,25;CL:0000625,2.14e-19,11;CL:0000838,8.56e-12,52;CL:0000542,1.46e-11,53;CL:0000051,1.46e-11,53;CL:0000624,1.15e-09,6;CL:0000815,6.58e-08,2;CL:0000792,6.58e-08,2;CL:0002677,6.58e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.97e-26;18!CL:0000051;4.17e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.67e-10!4;UBERON:0005058!1.67e-10!4;UBERON:0009113!1.67e-10!4;UBERON:0003295!1.67e-10!4;UBERON:0005562!1.67e-10!4;UBERON:0004177!6.77e-10!7;UBERON:0003351!3.96e-07!6;UBERON:0000974!5.29e-07!10;UBERON:0001042!6.00e-07!10;UBERON:0009145!6.00e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.41e-28;2!UBERON:0005058;4.41e-28;2!UBERON:0009113;4.41e-28;2!UBERON:0000029;1.97e-14;1!UBERON:0004177;7.67e-12;5!UBERON:0005057;7.67e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.23e-14,1;UBERON:0002370,1.41e-14,4;UBERON:0005058,1.41e-14,4;UBERON:0009113,1.41e-14,4;UBERON:0003295,1.41e-14,4;UBERON:0005562,1.41e-14,4;UBERON:0003351,4.97e-10,6;UBERON:0004177,1.01e-08,7;UBERON:0005057,1.01e-08,7 | |||
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|short_description=p@chr2:95740679..95740695,+ | |||
}} | }} |
Latest revision as of 13:11, 29 July 2015
Short description: | p@chr2:95740679..95740695, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:95740679..95740695, + |
Coexpression cluster: | C1225_thymus_acute_CD4_CD8_Hodgkin_Peripheral_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.13e-26 | 18 |
alpha-beta T cell | 7.13e-26 | 18 |
immature T cell | 7.13e-26 | 18 |
mature T cell | 7.13e-26 | 18 |
immature alpha-beta T cell | 7.13e-26 | 18 |
T cell | 4.88e-25 | 25 |
pro-T cell | 4.88e-25 | 25 |
CD8-positive, alpha-beta T cell | 2.14e-19 | 11 |
lymphoid lineage restricted progenitor cell | 8.56e-12 | 52 |
lymphocyte | 1.46e-11 | 53 |
common lymphoid progenitor | 1.46e-11 | 53 |
CD4-positive, alpha-beta T cell | 1.15e-09 | 6 |
regulatory T cell | 6.58e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.58e-08 | 2 |
naive regulatory T cell | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.23e-14 | 1 |
thymus | 1.41e-14 | 4 |
hemolymphoid system gland | 1.41e-14 | 4 |
thymic region | 1.41e-14 | 4 |
pharyngeal gland | 1.41e-14 | 4 |
thymus primordium | 1.41e-14 | 4 |
pharyngeal epithelium | 4.97e-10 | 6 |
hemopoietic organ | 1.01e-08 | 7 |
immune organ | 1.01e-08 | 7 |