FFCP PHASE1:Hg19::chr3:170076246..170076261,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:170076246..170076261,+
|short_description=p8@SKIL
|description=CAGE_peak_8_at_SKIL_5end
|association_with_transcript=-35bp_to_ENST00000490989_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6498 | |EntrezGene=6498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10897 | |HGNC=10897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000490989_5end | |||
|cluster_id=chr3:170076246..170076261,+ | |||
|coexpression_cluster_id=C4304 | |||
|description=CAGE_peak_8_at_SKIL_5end | |||
|id=chr3:170076246..170076261,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.27e-08!248;CL:0000220!1.65e-07!246;CL:1000413!4.64e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.02e-24;5!CL:0002321;2.37e-14;15!CL:0000540;1.19e-07;6!CL:0000404;1.19e-07;6!CL:0000064;2.63e-07;3!CL:0000067;2.63e-07;3!CL:0005012;2.63e-07;3!CL:0002304;2.63e-07;3!CL:0002166;4.76e-07;3!CL:0002580;4.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.87e-24,5;CL:0000540,1.60e-07,6;CL:0000031,1.60e-07,6;CL:0000404,1.60e-07,6;CL:0000064,2.56e-07,3;CL:0000067,2.56e-07,3;CL:0005012,2.56e-07,3;CL:0002304,2.56e-07,3;CL:0002580,4.30e-07,3;CL:0002166,5.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;1.19e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003915!4.64e-07!9;UBERON:0004700!4.64e-07!9;UBERON:0001917!4.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.63e-07;3!UBERON:0001775;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.56e-07,3;UBERON:0001775,2.56e-07,3 | |||
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| ||
|short_description=p8@SKIL | |||
}} | }} |
Latest revision as of 16:03, 16 September 2015
Short description: | p8@SKIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SKIL_5end |
Coexpression cluster: | C4304_iPS_H9_Lens_HES3GFP_Ciliary_renal_Fibroblast |
Association with transcript: | -35bp_to_ENST00000490989_5end |
EntrezGene: | SKIL |
HGNC: | 10897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.87e-24 | 5 |
neuron | 1.60e-07 | 6 |
neuroblast | 1.60e-07 | 6 |
electrically signaling cell | 1.60e-07 | 6 |
ciliated cell | 2.56e-07 | 3 |
ciliated epithelial cell | 2.56e-07 | 3 |
multi-ciliated epithelial cell | 2.56e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.56e-07 | 3 |
preadipocyte of the breast | 4.30e-07 | 3 |
epithelial cell of Malassez | 5.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.56e-07 | 3 |
ciliary body | 2.56e-07 | 3 |