FFCP PHASE1:Hg19::chr3:71631382..71631413,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:71631382..71631413,-
|short_description=p20@FOXP1
|description=CAGE_peak_20_at_FOXP1_5end
|association_with_transcript=-278bp_to_ENST00000498154_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-278bp_to_ENST00000498154_5end | |||
|cluster_id=chr3:71631382..71631413,- | |||
|description=CAGE_peak_20_at_FOXP1_5end | |||
|id=chr3:71631382..71631413,- | |||
|ontology_enrichment_celltype=CL:0002057!2.27e-12!42;CL:0000763!1.94e-11!112;CL:0000049!1.94e-11!112;CL:0000860!2.12e-10!45;CL:0000766!2.51e-10!76;CL:0000839!7.10e-10!70;CL:0000557!1.64e-09!71;CL:0002194!4.76e-08!63;CL:0000576!4.76e-08!63;CL:0000040!4.76e-08!63;CL:0000559!4.76e-08!63;CL:0002009!1.23e-07!65;CL:0000988!9.57e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-14;33!CL:0002057;2.57e-14;33!CL:0000576;9.52e-12;48!CL:0000766;4.26e-10;69!CL:0000473;1.66e-09;39!CL:0000234;1.66e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.82e-19,72;CL:0000860,4.88e-18,42;CL:0002057,4.88e-18,42;CL:0000763,3.45e-17,108;CL:0000049,3.45e-17,108;CL:0000839,1.40e-16,66;CL:0000557,2.85e-16,67;CL:0000473,1.29e-14,48;CL:0000234,1.29e-14,48;CL:0002194,3.00e-14,59;CL:0000576,3.00e-14,59;CL:0000040,3.00e-14,59;CL:0000559,3.00e-14,59;CL:0000988,8.45e-14,177;CL:0002009,1.84e-13,61;CL:0000037,7.05e-12,168;CL:0002032,5.06e-11,161;CL:0000837,5.06e-11,161;CL:0000738,8.67e-10,136;CL:0002031,6.10e-08,120;CL:0000134,9.74e-08,354;CL:0002320,3.62e-07,361;CL:0000349,9.91e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002057;2.93e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.80e-08!86;UBERON:0002371!3.12e-08!80;UBERON:0002390!3.52e-08!102;UBERON:0003061!3.52e-08!102;UBERON:0003081!8.11e-08!216;UBERON:0000478!2.52e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.14e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.88e-15,82;UBERON:0002371,6.56e-15,76;UBERON:0002390,4.95e-13,98;UBERON:0003061,4.95e-13,98;UBERON:0004765,1.51e-12,90;UBERON:0003081,4.52e-11,203;UBERON:0001434,9.38e-11,100;UBERON:0002193,1.14e-10,108;UBERON:0002405,4.04e-10,93;UBERON:0000478,1.18e-09,24;UBERON:0002384,1.90e-07,371 | |||
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| ||
|short_description=p20@FOXP1 | |||
}} | }} |
Latest revision as of 13:58, 19 September 2015
Short description: | p20@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_FOXP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -278bp_to_ENST00000498154_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.82e-19 | 72 |
classical monocyte | 4.88e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-18 | 42 |
myeloid cell | 3.45e-17 | 108 |
common myeloid progenitor | 3.45e-17 | 108 |
myeloid lineage restricted progenitor cell | 1.40e-16 | 66 |
granulocyte monocyte progenitor cell | 2.85e-16 | 67 |
defensive cell | 1.29e-14 | 48 |
phagocyte | 1.29e-14 | 48 |
monopoietic cell | 3.00e-14 | 59 |
monocyte | 3.00e-14 | 59 |
monoblast | 3.00e-14 | 59 |
promonocyte | 3.00e-14 | 59 |
hematopoietic cell | 8.45e-14 | 177 |
macrophage dendritic cell progenitor | 1.84e-13 | 61 |
hematopoietic stem cell | 7.05e-12 | 168 |
hematopoietic oligopotent progenitor cell | 5.06e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.06e-11 | 161 |
leukocyte | 8.67e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.10e-08 | 120 |
mesenchymal cell | 9.74e-08 | 354 |
connective tissue cell | 3.62e-07 | 361 |
extraembryonic cell | 9.91e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.88e-15 | 82 |
bone marrow | 6.56e-15 | 76 |
hematopoietic system | 4.95e-13 | 98 |
blood island | 4.95e-13 | 98 |
skeletal element | 1.51e-12 | 90 |
lateral plate mesoderm | 4.52e-11 | 203 |
skeletal system | 9.38e-11 | 100 |
hemolymphoid system | 1.14e-10 | 108 |
immune system | 4.04e-10 | 93 |
extraembryonic structure | 1.18e-09 | 24 |
connective tissue | 1.90e-07 | 371 |