FFCP PHASE1:Hg19::chr8:9952672..9952681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4482 | |EntrezGene=4482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7377 | |HGNC=7377 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJK1 | |UniProt=E5RJK1 | ||
|association_with_transcript=-379bp_to_ENST00000522907_5end | |association_with_transcript=-379bp_to_ENST00000522907_5end | ||
|cluster_id=chr8:9952672..9952681,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_12_at_MSRA_5end | |description=CAGE_peak_12_at_MSRA_5end | ||
Latest revision as of 16:58, 19 September 2015
| Short description: | p12@MSRA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_12_at_MSRA_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | -379bp_to_ENST00000522907_5end |
| EntrezGene: | MSRA |
| HGNC: | 7377 |
| UniProt: | E5RJK1 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p12@MSRA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 1.53e-41 | 20 |
| regional part of cerebral cortex | 6.34e-38 | 22 |
| regional part of telencephalon | 2.79e-34 | 32 |
| cerebral hemisphere | 2.79e-34 | 32 |
| cerebral cortex | 1.54e-33 | 25 |
| pallium | 1.54e-33 | 25 |
| brain grey matter | 2.62e-32 | 34 |
| gray matter | 2.62e-32 | 34 |
| telencephalon | 2.62e-32 | 34 |
| regional part of forebrain | 7.04e-27 | 41 |
Showing 1 to 10 of 41 entries
