FFCP PHASE1:Hg19::chr4:119274121..119274219,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:119274121..119274219,-
|short_description=p1@PRSS12
|description=CAGE_peak_1_at_PRSS12_5end
|association_with_transcript=0bp_to_ENST00000296498_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8492 | |EntrezGene=8492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9477 | |HGNC=9477 | ||
|TSSclassifier=strong | |||
|UniProt=P56730 | |UniProt=P56730 | ||
|association_with_transcript=0bp_to_ENST00000296498_5end | |||
|cluster_id=chr4:119274121..119274219,- | |||
|coexpression_cluster_id=C4364 | |||
|description=CAGE_peak_1_at_PRSS12_5end | |||
|id=chr4:119274121..119274219,- | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-28!180;CL:0000057!5.37e-20!75;CL:0000192!1.89e-13!42;CL:0000514!1.89e-13!42;CL:0002321!1.03e-12!248;CL:0000393!1.06e-12!60;CL:0000211!1.06e-12!60;CL:0000220!1.24e-12!246;CL:0000680!2.30e-12!57;CL:0000056!2.30e-12!57;CL:0000355!2.30e-12!57;CL:0000187!4.24e-12!54;CL:0002620!2.72e-11!23;CL:0000183!4.20e-11!59;CL:0000359!8.19e-10!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.65e-12;23!CL:0000192;6.00e-11;43!CL:0000359;8.86e-10;32!CL:0000057;1.25e-08;73!CL:0000187;9.84e-08;55!CL:0000393;3.10e-07;61!CL:0000211;3.10e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.01e-20,76;CL:0000192,9.55e-15,43;CL:0000514,9.55e-15,43;CL:0000393,3.25e-14,61;CL:0000211,3.25e-14,61;CL:0000680,7.34e-14,58;CL:0000056,7.34e-14,58;CL:0000355,7.34e-14,58;CL:0000187,1.38e-13,55;CL:0002620,7.26e-12,23;CL:0002321,4.02e-11,250;CL:0000359,2.67e-10,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.00e-11;43!CL:0000355;2.38e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.34e-24!365;UBERON:0003102!1.31e-22!95;UBERON:0000914!1.24e-17!83;UBERON:0002329!1.24e-17!83;UBERON:0003077!1.24e-17!83;UBERON:0003059!1.24e-17!83;UBERON:0007282!1.24e-17!83;UBERON:0009618!1.24e-17!83;UBERON:0007285!1.24e-17!83;UBERON:0000486!2.76e-16!82;UBERON:0000481!3.41e-15!347;UBERON:0002100!5.82e-14!216;UBERON:0002097!1.45e-13!40;UBERON:0000468!1.49e-13!659;UBERON:0004290!2.18e-13!70;UBERON:0005256!2.04e-12!143;UBERON:0002199!2.69e-12!45;UBERON:0002416!2.69e-12!45;UBERON:0003104!4.04e-12!238;UBERON:0009142!4.04e-12!238;UBERON:0001134!4.18e-11!61;UBERON:0002036!4.18e-11!61;UBERON:0003082!4.18e-11!61;UBERON:0001444!4.44e-11!48;UBERON:0002385!4.50e-11!63;UBERON:0001015!4.50e-11!63;UBERON:0000383!4.50e-11!63;UBERON:0004119!9.22e-11!169;UBERON:0000925!9.22e-11!169;UBERON:0006595!9.22e-11!169;UBERON:0000467!1.09e-10!625;UBERON:0000480!1.86e-10!626;UBERON:0001007!1.56e-08!155;UBERON:0001555!1.56e-08!155;UBERON:0007026!1.56e-08!155;UBERON:0000165!4.88e-08!28;UBERON:0000930!4.88e-08!28;UBERON:0000922!9.39e-08!612;UBERON:0000483!1.69e-07!309;UBERON:0002050!2.36e-07!605;UBERON:0005423!2.36e-07!605;UBERON:0000119!2.37e-07!312;UBERON:0000923!3.47e-07!604;UBERON:0005291!3.47e-07!604;UBERON:0006598!3.47e-07!604;UBERON:0002532!3.47e-07!604;UBERON:0001637!8.24e-07!42;UBERON:0003509!8.24e-07!42;UBERON:0004572!8.24e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.76e-11;41!UBERON:0002199;2.34e-09;46!UBERON:0002416;2.34e-09;46!UBERON:0003102;3.35e-09;50!UBERON:0000165;2.21e-07;28!UBERON:0001444;2.32e-07;48!UBERON:0000033;4.85e-07;50!UBERON:0007811;6.55e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.19e-23,99;UBERON:0000486,5.91e-18,83;UBERON:0007524,2.83e-15,73;UBERON:0002329,7.33e-15,71;UBERON:0003059,7.33e-15,71;UBERON:0007282,7.33e-15,71;UBERON:0004290,7.33e-15,71;UBERON:0009618,7.33e-15,71;UBERON:0003077,1.08e-14,72;UBERON:0007285,1.08e-14,72;UBERON:0002097,1.65e-14,41;UBERON:0002199,4.44e-13,46;UBERON:0002416,4.44e-13,46;UBERON:0001134,2.04e-12,62;UBERON:0002036,2.04e-12,62;UBERON:0003082,2.04e-12,62;UBERON:0007503,2.50e-12,78;UBERON:0002385,4.18e-12,64;UBERON:0001015,4.18e-12,64;UBERON:0000383,4.18e-12,64;UBERON:0005256,7.86e-11,122;UBERON:0002100,9.35e-11,199;UBERON:0004119,3.85e-10,160;UBERON:0000925,3.85e-10,160;UBERON:0006595,3.85e-10,160;UBERON:0001444,4.44e-10,49;UBERON:0000033,1.19e-09,56;UBERON:0003104,4.43e-09,160;UBERON:0009142,4.43e-09,160;UBERON:0000490,2.51e-08,148;UBERON:0000153,2.62e-08,62;UBERON:0007811,2.62e-08,62;UBERON:0000165,7.23e-08,29;UBERON:0000930,7.23e-08,29;UBERON:0001007,1.24e-07,145;UBERON:0001555,1.24e-07,145;UBERON:0007026,1.24e-07,145;UBERON:0004573,3.17e-07,33;UBERON:0004571,3.17e-07,33 | |||
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| ||
|short_description=p1@PRSS12 | |||
}} | }} |
Latest revision as of 21:10, 24 September 2015
Short description: | p1@PRSS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRSS12_5end |
Coexpression cluster: | C4364_astrocytoma_Fibroblast_Smooth_Olfactory_sacrococcigeal_normal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000296498_5end |
EntrezGene: | PRSS12 |
HGNC: | 9477 |
UniProt: | P56730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.01e-20 | 76 |
smooth muscle cell | 9.55e-15 | 43 |
smooth muscle myoblast | 9.55e-15 | 43 |
electrically responsive cell | 3.25e-14 | 61 |
electrically active cell | 3.25e-14 | 61 |
muscle precursor cell | 7.34e-14 | 58 |
myoblast | 7.34e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.34e-14 | 58 |
muscle cell | 1.38e-13 | 55 |
skin fibroblast | 7.26e-12 | 23 |
embryonic cell | 4.02e-11 | 250 |
vascular associated smooth muscle cell | 2.67e-10 | 32 |