FFCP PHASE1:Hg19::chr4:146402966..146402985,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:146402966..146402985,+
|short_description=p2@SMAD1
|description=CAGE_peak_2_at_SMAD1_5end
|association_with_transcript=15bp_to_NM_005900,uc003ikc.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4086 | |EntrezGene=4086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6767 | |HGNC=6767 | ||
|TSSclassifier=strong | |||
|UniProt=Q15797 | |UniProt=Q15797 | ||
|association_with_transcript=15bp_to_NM_005900,uc003ikc.2_5end | |||
|cluster_id=chr4:146402966..146402985,+ | |||
|description=CAGE_peak_2_at_SMAD1_5end | |||
|id=chr4:146402966..146402985,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.42e-08!24;CL:0000220!4.15e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.25e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.03e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.42e-24!625;UBERON:0000468!3.27e-24!659;UBERON:0000480!4.17e-24!626;UBERON:0004111!1.21e-22!241;UBERON:0000477!9.20e-21!286;UBERON:0001049!4.89e-20!57;UBERON:0005068!4.89e-20!57;UBERON:0006241!4.89e-20!57;UBERON:0007135!4.89e-20!57;UBERON:0002616!7.16e-20!59;UBERON:0001017!8.63e-20!82;UBERON:0000955!1.14e-19!69;UBERON:0006238!1.14e-19!69;UBERON:0000923!5.06e-19!604;UBERON:0005291!5.06e-19!604;UBERON:0006598!5.06e-19!604;UBERON:0002532!5.06e-19!604;UBERON:0000475!6.46e-19!365;UBERON:0002050!9.77e-19!605;UBERON:0005423!9.77e-19!605;UBERON:0000033!1.07e-18!123;UBERON:0005743!3.57e-18!86;UBERON:0000153!5.43e-18!129;UBERON:0007811!5.43e-18!129;UBERON:0000922!1.50e-17!612;UBERON:0000073!5.69e-17!94;UBERON:0001016!5.69e-17!94;UBERON:0003080!1.49e-16!42;UBERON:0000483!1.80e-16!309;UBERON:0002780!2.45e-16!41;UBERON:0001890!2.45e-16!41;UBERON:0006240!2.45e-16!41;UBERON:0000119!2.52e-16!312;UBERON:0000025!7.45e-16!194;UBERON:0000062!2.63e-15!511;UBERON:0004121!2.68e-15!169;UBERON:0007023!3.66e-15!115;UBERON:0000924!7.72e-15!173;UBERON:0006601!7.72e-15!173;UBERON:0003075!2.04e-14!86;UBERON:0007284!2.04e-14!86;UBERON:0000481!6.13e-14!347;UBERON:0002020!8.50e-14!34;UBERON:0003528!8.50e-14!34;UBERON:0001893!1.13e-13!34;UBERON:0002346!1.22e-13!90;UBERON:0001869!1.60e-13!32;UBERON:0002791!1.90e-13!33;UBERON:0003056!1.08e-11!61;UBERON:0000956!2.98e-10!25;UBERON:0000203!2.98e-10!25;UBERON:0002619!4.60e-10!22;UBERON:0001950!3.17e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.59e-12;32!UBERON:0003528;3.34e-12;34!UBERON:0002020;3.34e-12;34!UBERON:0002791;6.04e-12;32!UBERON:0000073;6.12e-12;53!UBERON:0002616;6.12e-12;53!UBERON:0001893;6.35e-12;34!UBERON:0002780;6.57e-12;41!UBERON:0001890;6.57e-12;41!UBERON:0000956;3.16e-10;25!UBERON:0000203;3.16e-10;25!UBERON:0002619;5.40e-10;22!UBERON:0001017;3.53e-09;75!UBERON:0001950;3.99e-09;20!UBERON:0000955;7.55e-09;68!UBERON:0001016;1.85e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.68e-22,240;UBERON:0000073,2.02e-20,53;UBERON:0002616,2.02e-20,53;UBERON:0001049,5.93e-20,56;UBERON:0005068,5.93e-20,56;UBERON:0006241,5.93e-20,56;UBERON:0007135,5.93e-20,56;UBERON:0001017,1.09e-19,81;UBERON:0000955,1.43e-19,68;UBERON:0006238,1.43e-19,68;UBERON:0001016,2.80e-18,89;UBERON:0011216,4.88e-17,223;UBERON:0002780,1.87e-16,41;UBERON:0001890,1.87e-16,41;UBERON:0003080,1.87e-16,41;UBERON:0006240,1.87e-16,41;UBERON:0000483,3.06e-16,306;UBERON:0000119,4.29e-16,309;UBERON:0002050,5.87e-16,564;UBERON:0000923,7.08e-16,560;UBERON:0010316,7.08e-16,560;UBERON:0005291,7.08e-16,560;UBERON:0006598,7.08e-16,560;UBERON:0010317,7.08e-16,560;UBERON:0002532,7.08e-16,560;UBERON:0000025,1.78e-15,192;UBERON:0010371,2.23e-15,104;UBERON:0004121,2.35e-15,171;UBERON:0000924,2.35e-15,171;UBERON:0006601,2.35e-15,171;UBERON:0007023,4.95e-15,114;UBERON:0005423,2.14e-14,581;UBERON:0003075,2.51e-14,82;UBERON:0007284,2.51e-14,82;UBERON:0003528,6.78e-14,34;UBERON:0002020,6.78e-14,34;UBERON:0001893,9.01e-14,34;UBERON:0001869,1.28e-13,32;UBERON:0002346,1.61e-13,86;UBERON:0000922,2.44e-13,592;UBERON:0002791,3.95e-13,32;UBERON:0010314,1.62e-11,132;UBERON:0003056,5.57e-11,61;UBERON:0000956,2.54e-10,25;UBERON:0000203,2.54e-10,25;UBERON:0002619,3.93e-10,22;UBERON:0001950,2.75e-09,20 | |||
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| ||
|short_description=p2@SMAD1 | |||
}} | }} |
Latest revision as of 23:11, 15 September 2015
Short description: | p2@SMAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_NM_005900, uc003ikc.2_5end |
EntrezGene: | SMAD1 |
HGNC: | 6767 |
UniProt: | Q15797 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.03e-08 | 24 |