FFCP PHASE1:Hg19::chr4:2965263..2965286,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:2965263..2965286,+
|short_description=p4@GRK4
|description=CAGE_peak_4_at_GRK4_5end
|association_with_transcript=-48bp_to_ENST00000398051_5end
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2868 | |EntrezGene=2868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4543 | |HGNC=4543 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000398051_5end | |||
|cluster_id=chr4:2965263..2965286,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_GRK4_5end | |||
|id=chr4:2965263..2965286,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;9.48e-18;1!CL:0000557;9.48e-18;1!CL:0000746;6.88e-07;3!CL:0002579;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.48e-18;1!UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10!CL:0000513;6.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.40e-08!94;UBERON:0001016!7.40e-08!94;UBERON:0001049!9.44e-08!57;UBERON:0005068!9.44e-08!57;UBERON:0006241!9.44e-08!57;UBERON:0007135!9.44e-08!57;UBERON:0000955!1.99e-07!69;UBERON:0006238!1.99e-07!69;UBERON:0002346!5.94e-07!90;UBERON:0002616!6.43e-07!59;UBERON:0003075!6.94e-07!86;UBERON:0007284!6.94e-07!86;UBERON:0005743!7.47e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;9.48e-18;1!UBERON:0002081;1.51e-09;2!UBERON:0000473;1.99e-09;8!UBERON:0003135;4.30e-07;11!UBERON:0004151;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,7.37e-18,1;UBERON:0002081,1.33e-09,2;UBERON:0010227,1.33e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0004151,8.15e-07,3 | |||
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| ||
|short_description=p4@GRK4 | |||
}} | }} |
Latest revision as of 13:08, 17 September 2015
Short description: | p4@GRK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRK4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -48bp_to_ENST00000398051_5end |
EntrezGene: | GRK4 |
HGNC: | 4543 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 6.88e-07 | 3 |
cardiac muscle myoblast | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 7.37e-18 | 1 |
cardiac atrium | 1.33e-09 | 2 |
future cardiac atrium | 1.33e-09 | 2 |
testis | 1.99e-09 | 8 |
male reproductive organ | 4.30e-07 | 11 |
cardiac chamber | 8.15e-07 | 3 |