FFCP PHASE1:Hg19::chr7:116165082..116165097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=857 | |EntrezGene=857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1527 | |HGNC=1527 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000489856_5end | |association_with_transcript=16bp_to_ENST00000489856_5end | ||
|cluster_id=chr7:116165082..116165097,+ | |||
|description=CAGE_peak_3_at_CAV1_5end | |description=CAGE_peak_3_at_CAV1_5end | ||
|id=chr7:116165082..116165097,+ | |id=chr7:116165082..116165097,+ | ||
Latest revision as of 07:23, 25 September 2015
| Short description: | p3@CAV1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CAV1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 16bp_to_ENST00000489856_5end |
| EntrezGene: | CAV1 |
| HGNC: | 1527 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CAV1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 7.97e-20 | 250 |
| mesodermal cell | 8.97e-18 | 121 |
| endothelial cell of vascular tree | 8.34e-17 | 24 |
| squamous epithelial cell | 1.02e-15 | 63 |
| endothelial cell | 9.42e-14 | 36 |
| blood vessel endothelial cell | 1.11e-12 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.11e-12 | 18 |
| lining cell | 5.95e-12 | 58 |
| barrier cell | 5.95e-12 | 58 |
| fibroblast | 2.36e-11 | 76 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 2.78e-20 | 99 |
| vasculature | 2.81e-18 | 78 |
| vascular system | 2.81e-18 | 78 |
| vessel | 1.28e-16 | 68 |
| unilaminar epithelium | 5.84e-16 | 148 |
| splanchnic layer of lateral plate mesoderm | 2.87e-15 | 83 |
| multilaminar epithelium | 9.42e-14 | 83 |
| cell layer | 1.52e-13 | 309 |
| epithelial tube open at both ends | 1.53e-13 | 59 |
| blood vessel | 1.53e-13 | 59 |
Showing 1 to 10 of 64 entries
