FFCP PHASE1:Hg19::chr5:145427166..145427178,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:145427166..145427178,+
|short_description=p@chr5:145427166..145427178,+
|description=CAGE_peak_at_chr5:145427166..145427178,+
|association_with_transcript=...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:145427166..145427178,+ | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr5:145427166..145427178,+ | |||
|id=chr5:145427166..145427178,+ | |||
|ontology_enrichment_celltype=CL:0000174!6.60e-12!3;CL:0002097!2.20e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000174;8.37e-39;3!CL:0002174;1.33e-29;1!CL:0000501;1.33e-29;1!CL:0002097;1.15e-15;2!CL:0000163;1.08e-13;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000174,6.91e-39,3;CL:0002174,9.99e-30,1;CL:0000501,9.99e-30,1;CL:0002097,1.15e-15,2;CL:0000163,1.02e-13,9 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.16e-29;1!UBERON:0007123;2.27e-23;5 | |||
|ontology_enrichment_disease=DOID:114!2.20e-08!2;DOID:4929!1.76e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.54e-15;2!DOID:3493;1.54e-15;2!DOID:1287;1.96e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.54e-15,2;DOID:3493,1.78e-15,2;DOID:1287,1.96e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002294!7.72e-12!7;UBERON:0001173!7.72e-12!7;UBERON:0004912!7.72e-12!7;UBERON:0002394!5.44e-08!4;UBERON:0003928!5.44e-08!4;UBERON:0000341!6.11e-08!2;UBERON:0002046!5.94e-07!5;UBERON:0004117!5.94e-07!5;UBERON:0007689!5.94e-07!5;UBERON:0007123!5.94e-07!5;UBERON:0003091!5.94e-07!5;UBERON:0005911!8.88e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;3.16e-29;1!UBERON:0002046;2.27e-23;5!UBERON:0002081;2.37e-15;2!UBERON:0002369;6.73e-11;3!UBERON:0001235;6.73e-11;3!UBERON:0006858;6.73e-11;3!UBERON:0004151;1.09e-10;3!UBERON:0002368;6.06e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.16e-29,1;UBERON:0002046,2.27e-23,5;UBERON:0004117,2.27e-23,5;UBERON:0007689,2.27e-23,5;UBERON:0007123,2.27e-23,5;UBERON:0003091,2.27e-23,5;UBERON:0002081,2.37e-15,2;UBERON:0010227,2.37e-15,2;UBERON:0009722,3.30e-11,11;UBERON:0007690,3.30e-11,11;UBERON:0002369,6.73e-11,3;UBERON:0001235,6.73e-11,3;UBERON:0006858,6.73e-11,3;UBERON:0004151,1.09e-10,3;UBERON:0002368,5.59e-08,35;UBERON:0008814,3.24e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,2.57859264851974,0,0,0.916641696046735,0,0.399358000997982,2.14613024068285,0.89268582976749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,13.2953786652454,0,0,0,0,0,0,0,0,0.38582807654183,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,2.07260472469858,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0.23806443146374,0,0,0.112131862580613,1.52753179867596,1.41482032270754,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,2.57859264851974,0,0,0.916641696046735,0,0.399358000997982,2.14613024068285,0.89268582976749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,13.2953786652454,0,0,0,0,0,0,0,0,0.38582807654183,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,2.07260472469858,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0.23806443146374,0,0,0.112131862580613,1.52753179867596,1.41482032270754,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr5:145427166..145427178,+ | |||
}} | }} |
Latest revision as of 11:03, 30 July 2015
Short description: | p@chr5:145427166..145427178, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:145427166..145427178, + |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
steroid hormone secreting cell | 6.91e-39 | 3 |
follicular cell of ovary | 9.99e-30 | 1 |
granulosa cell | 9.99e-30 | 1 |
cortical cell of adrenal gland | 1.15e-15 | 2 |
endocrine cell | 1.02e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 3.16e-29 | 1 |
thyroid gland | 2.27e-23 | 5 |
pharyngeal pouch | 2.27e-23 | 5 |
thyroid diverticulum | 2.27e-23 | 5 |
pharyngeal pouch 2 | 2.27e-23 | 5 |
thyroid primordium | 2.27e-23 | 5 |
cardiac atrium | 2.37e-15 | 2 |
future cardiac atrium | 2.37e-15 | 2 |
entire pharyngeal arch endoderm | 3.30e-11 | 11 |
early pharyngeal endoderm | 3.30e-11 | 11 |
adrenal gland | 6.73e-11 | 3 |
adrenal cortex | 6.73e-11 | 3 |
adrenal/interrenal gland | 6.73e-11 | 3 |
cardiac chamber | 1.09e-10 | 3 |
endocrine gland | 5.59e-08 | 35 |
pharyngeal arch system | 3.24e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.54e-15 | 2 |
signet ring cell adenocarcinoma | 1.78e-15 | 2 |
cardiovascular system disease | 1.96e-08 | 4 |