FFCP PHASE1:Hg19::chr6:154858334..154858342,-: Difference between revisions
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|id=chr6:154858334..154858342,-
|short_description=p@chr6:154858334..154858342,-
|description=CAGE_peak_at_chr6:154858334..154858342,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:154858334..154858342,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr6:154858334..154858342,- | |||
|id=chr6:154858334..154858342,- | |||
|ontology_enrichment_celltype=CL:0000167!2.58e-34!1;CL:0000164!2.58e-34!1;CL:0000502!2.58e-34!1;CL:0000172!2.58e-34!1;CL:0000173!2.58e-34!1;CL:0002351!2.58e-34!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.55e-98;1!CL:0000164;2.55e-98;1!CL:0000502;2.55e-98;1!CL:0000172;2.55e-98;1!CL:0000173;2.55e-98;1!CL:0000150;2.45e-12;9!CL:0000163;2.45e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.55e-98,1;CL:0000164,2.55e-98,1;CL:0000502,2.55e-98,1;CL:0000172,2.55e-98,1;CL:0000173,2.55e-98,1;CL:0002351,2.55e-98,1;CL:0000150,2.45e-12,9;CL:0000163,2.45e-12,9 | |||
|ontology_enrichment_development_v019=CL:0002351;2.55e-98;1 | |||
|ontology_enrichment_disease=DOID:4430!2.58e-34!1;DOID:5409!1.12e-09!4;DOID:169!7.58e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.55e-98;1!DOID:5409;5.56e-26;4!DOID:169;9.07e-18;6!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:171;3.02e-11;10!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.55e-98,1;DOID:5409,5.56e-26,4;DOID:169,9.07e-18,6;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:171,3.02e-11,10;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.85e-17!8;UBERON:0003135!5.42e-13!11;UBERON:0000991!2.86e-07!21;UBERON:0009196!2.86e-07!21;UBERON:0009117!2.86e-07!21;UBERON:0005564!2.86e-07!21;UBERON:0004176!5.57e-07!22;UBERON:0003101!5.57e-07!22;UBERON:0000079!5.57e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr6:154858334..154858342,- | |||
}} | }} |
Latest revision as of 21:12, 30 July 2015
Short description: | p@chr6:154858334..154858342, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:154858334..154858342, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.55e-98 | 1 |
enteroendocrine cell | 2.55e-98 | 1 |
type D enteroendocrine cell | 2.55e-98 | 1 |
somatostatin secreting cell | 2.55e-98 | 1 |
pancreatic D cell | 2.55e-98 | 1 |
progenitor cell of endocrine pancreas | 2.55e-98 | 1 |
glandular epithelial cell | 2.45e-12 | 9 |
endocrine cell | 2.45e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.55e-98 | 1 |
lung small cell carcinoma | 5.56e-26 | 4 |
neuroendocrine tumor | 9.07e-18 | 6 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
neuroectodermal tumor | 3.02e-11 | 10 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |