FFCP PHASE1:Hg19::chr6:1612219..1612239,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:1612219..1612239,+
|short_description=p8@FOXC1
|description=CAGE_peak_8_at_FOXC1_5end
|association_with_transcript=-337bp_to_AK021858_5end
|EntrezGene=229...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2296 | |EntrezGene=2296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3800 | |HGNC=3800 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-337bp_to_AK021858_5end | |||
|cluster_id=chr6:1612219..1612239,+ | |||
|description=CAGE_peak_8_at_FOXC1_5end | |||
|id=chr6:1612219..1612239,+ | |||
|ontology_enrichment_celltype=CL:0000499!6.21e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.96e-17;9!CL:0000447;2.96e-17;9!CL:0000214;6.27e-14;3!CL:0000327;4.39e-10;15!CL:0000138;3.21e-07;6!CL:0000499;9.72e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.11e-17,9;CL:0000447,2.11e-17,9;CL:0000214,3.75e-14,3;CL:0000327,3.61e-10,15;CL:0000058,3.19e-07,6;CL:0000138,3.19e-07,6;CL:0000499,9.00e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.22e-19;8!UBERON:0000982;5.22e-19;8!UBERON:0004770;5.22e-19;8!UBERON:0006915;6.27e-14;3!UBERON:0007616;6.27e-14;3!UBERON:0002217;6.27e-14;3!UBERON:0002018;6.27e-14;3!UBERON:0001829;2.78e-10;2!UBERON:0004089;8.75e-10;2!UBERON:0011135;3.31e-08;5!UBERON:0002216;3.31e-08;5!UBERON:0011134;3.31e-08;5!UBERON:0002209;3.31e-08;5!UBERON:0002213;3.31e-08;5!UBERON:0007844;3.31e-08;5!UBERON:0011138;3.31e-08;5!UBERON:0001130;3.31e-08;5!UBERON:0001066;3.31e-08;5!UBERON:0001468;3.31e-08;5!UBERON:0001044;3.21e-07;6!UBERON:0003293;3.21e-07;6!UBERON:0003294;3.21e-07;6!UBERON:0010047;3.21e-07;6!UBERON:0003408;3.21e-07;6!UBERON:0000167;3.21e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,2.21e-19,8;UBERON:0000982,2.21e-19,8;UBERON:0004770,2.21e-19,8;UBERON:0006915,3.75e-14,3;UBERON:0007616,3.75e-14,3;UBERON:0002217,3.75e-14,3;UBERON:0002018,3.75e-14,3;UBERON:0001829,2.74e-10,2;UBERON:0004089,4.87e-10,2;UBERON:0011135,2.26e-08,5;UBERON:0002216,2.26e-08,5;UBERON:0011134,2.26e-08,5;UBERON:0002209,2.26e-08,5;UBERON:0002213,2.26e-08,5;UBERON:0005856,2.26e-08,5;UBERON:0005866,2.26e-08,5;UBERON:0005863,2.26e-08,5;UBERON:0007844,2.26e-08,5;UBERON:0011138,2.26e-08,5;UBERON:0001130,2.26e-08,5;UBERON:0001066,2.26e-08,5;UBERON:0001468,2.26e-08,5;UBERON:0001044,3.25e-07,6;UBERON:0003293,3.25e-07,6;UBERON:0003294,3.25e-07,6;UBERON:0010047,3.25e-07,6;UBERON:0000167,3.25e-07,6 | |||
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| ||
|short_description=p8@FOXC1 | |||
}} | }} |
Latest revision as of 16:34, 16 September 2015
Short description: | p8@FOXC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FOXC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -337bp_to_AK021858_5end |
EntrezGene: | FOXC1 |
HGNC: | 3800 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.11e-17 | 9 |
carbohydrate secreting cell | 2.11e-17 | 9 |
synovial cell | 3.75e-14 | 3 |
extracellular matrix secreting cell | 3.61e-10 | 15 |
chondroblast | 3.19e-07 | 6 |
chondrocyte | 3.19e-07 | 6 |
stromal cell | 9.00e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
articulation | 2.21e-19 | 8 |
skeletal joint | 2.21e-19 | 8 |
articular system | 2.21e-19 | 8 |
stratified squamous epithelium | 3.75e-14 | 3 |
layer of synovial tissue | 3.75e-14 | 3 |
synovial joint | 3.75e-14 | 3 |
synovial membrane of synovial joint | 3.75e-14 | 3 |
major salivary gland | 2.74e-10 | 2 |
midface | 4.87e-10 | 2 |
intervertebral cartilage | 2.26e-08 | 5 |
symphysis | 2.26e-08 | 5 |
nonsynovial joint | 2.26e-08 | 5 |
fibrous joint | 2.26e-08 | 5 |
cartilaginous joint | 2.26e-08 | 5 |
developing mesenchymal condensation | 2.26e-08 | 5 |
pre-cartilage condensation | 2.26e-08 | 5 |
cartilaginous condensation | 2.26e-08 | 5 |
cartilage element | 2.26e-08 | 5 |
post-cranial axial skeletal system | 2.26e-08 | 5 |
vertebral column | 2.26e-08 | 5 |
intervertebral disk | 2.26e-08 | 5 |
intervertebral joint | 2.26e-08 | 5 |
saliva-secreting gland | 3.25e-07 | 6 |
gland of oral region | 3.25e-07 | 6 |
gland of foregut | 3.25e-07 | 6 |
oral gland | 3.25e-07 | 6 |
oral cavity | 3.25e-07 | 6 |