FFCP PHASE1:Hg19::chr6:35773123..35773143,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:35773123..35773143,+
|short_description=p1@LHFPL5
|description=CAGE_peak_1_at_LHFPL5_5end
|association_with_transcript=52bp_to_ENST00000360215,NM_182548,uc...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222662 | |EntrezGene=222662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21253 | |HGNC=21253 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAF8,B3KX66 | |UniProt=Q8TAF8,B3KX66 | ||
|association_with_transcript=52bp_to_ENST00000360215,NM_182548,uc003olg.1_5end | |||
|cluster_id=chr6:35773123..35773143,+ | |||
|description=CAGE_peak_1_at_LHFPL5_5end | |||
|id=chr6:35773123..35773143,+ | |||
|ontology_enrichment_celltype=CL:0000242!4.76e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.59e-21;2!CL:0000242;8.59e-21;2!CL:0000167;9.55e-12;1!CL:0000164;9.55e-12;1!CL:0000502;9.55e-12;1!CL:0000172;9.55e-12;1!CL:0000173;9.55e-12;1!CL:0000312;6.96e-09;5!CL:0000240;1.52e-07;6!CL:0000311;1.52e-07;6!CL:0000079;1.52e-07;6!CL:0000237;1.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.47e-21,2;CL:0000167,9.57e-12,1;CL:0000164,9.57e-12,1;CL:0000502,9.57e-12,1;CL:0000172,9.57e-12,1;CL:0000173,9.57e-12,1;CL:0002351,9.57e-12,1;CL:0000312,4.87e-09,5;CL:0000240,1.13e-07,6;CL:0000311,1.13e-07,6;CL:0000079,1.13e-07,6;CL:0000237,1.13e-07,6;CL:0000036,1.13e-07,6;CL:0000357,1.13e-07,6;CL:0000114,1.13e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;9.55e-12;1!CL:0000357;1.52e-07;6!CL:0000114;1.52e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;9.55e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.57e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!3.60e-65!34;UBERON:0003528!3.60e-65!34;UBERON:0001869!6.10e-65!32;UBERON:0001049!2.01e-62!57;UBERON:0005068!2.01e-62!57;UBERON:0006241!2.01e-62!57;UBERON:0007135!2.01e-62!57;UBERON:0002780!5.62e-62!41;UBERON:0001890!5.62e-62!41;UBERON:0006240!5.62e-62!41;UBERON:0001893!8.49e-61!34;UBERON:0003080!2.43e-60!42;UBERON:0002791!7.73e-58!33;UBERON:0002616!1.33e-56!59;UBERON:0000955!1.89e-55!69;UBERON:0006238!1.89e-55!69;UBERON:0001017!2.00e-53!82;UBERON:0005743!3.67e-53!86;UBERON:0000073!3.32e-52!94;UBERON:0001016!3.32e-52!94;UBERON:0002619!7.71e-52!22;UBERON:0003075!2.28e-48!86;UBERON:0007284!2.28e-48!86;UBERON:0001950!5.07e-46!20;UBERON:0002346!8.73e-46!90;UBERON:0000956!3.23e-45!25;UBERON:0000203!3.23e-45!25;UBERON:0003056!5.01e-45!61;UBERON:0007023!3.75e-34!115;UBERON:0000033!9.10e-31!123;UBERON:0000153!6.90e-29!129;UBERON:0007811!6.90e-29!129;UBERON:0004121!8.32e-28!169;UBERON:0000924!6.45e-27!173;UBERON:0006601!6.45e-27!173;UBERON:0002420!1.78e-21!9;UBERON:0007245!1.78e-21!9;UBERON:0010009!1.78e-21!9;UBERON:0010011!1.78e-21!9;UBERON:0000454!1.78e-21!9;UBERON:0002308!3.64e-21!9;UBERON:0000125!3.64e-21!9;UBERON:0000200!4.10e-20!6;UBERON:0001871!5.58e-19!7;UBERON:0002021!3.50e-16!5;UBERON:0000025!3.60e-16!194;UBERON:0000349!3.73e-16!5;UBERON:0009663!6.79e-16!7;UBERON:0000369!2.79e-13!4;UBERON:0002435!2.79e-13!4;UBERON:0000204!2.79e-13!4;UBERON:0010082!2.79e-13!4;UBERON:0000064!3.11e-13!219;UBERON:0000483!2.03e-11!309;UBERON:0000119!3.34e-11!312;UBERON:0004111!3.84e-11!241;UBERON:0002771!8.57e-11!3;UBERON:0005383!2.40e-10!3;UBERON:0005382!2.40e-10!3;UBERON:0000988!1.33e-09!3;UBERON:0002298!4.10e-09!8;UBERON:0000477!1.21e-08!286;UBERON:0000475!4.85e-08!365;UBERON:0001870!6.23e-08!2;UBERON:0003296!6.62e-08!4;UBERON:0010133!6.62e-08!4;UBERON:0001905!1.37e-07!2;UBERON:0002757!1.37e-07!2;UBERON:0010134!1.37e-07!2;UBERON:0002784!1.37e-07!2;UBERON:0005408!1.37e-07!2;UBERON:0001899!1.37e-07!2;UBERON:0001954!1.61e-07!2;UBERON:0003022!1.61e-07!2;UBERON:0002421!1.61e-07!2;UBERON:0002600!1.61e-07!2;UBERON:0001876!2.23e-07!2;UBERON:0001873!2.30e-07!2;UBERON:0010122!2.30e-07!2;UBERON:0001875!4.46e-07!2;UBERON:0006514!4.46e-07!2;UBERON:0002148!5.05e-07!2;UBERON:0009662!5.05e-07!2;UBERON:0002360!7.31e-07!2;UBERON:0000094!7.31e-07!2;UBERON:0007645!7.31e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;4.82e-41;6!UBERON:0002619;1.43e-33;22!UBERON:0001870;2.87e-30;3!UBERON:0000956;1.41e-29;25!UBERON:0000203;1.41e-29;25!UBERON:0001950;3.66e-29;20!UBERON:0001869;9.31e-26;32!UBERON:0001893;2.71e-21;34!UBERON:0002702;8.59e-21;2!UBERON:0003528;2.32e-20;34!UBERON:0002020;2.32e-20;34!UBERON:0002791;2.32e-20;32!UBERON:0002780;5.80e-19;41!UBERON:0001890;5.80e-19;41!UBERON:0002581;2.81e-11;1!UBERON:0003112;2.81e-11;1!UBERON:0011158;2.81e-11;1!UBERON:0007190;2.81e-11;1!UBERON:0003128;2.81e-11;1!UBERON:0001703;2.81e-11;1!UBERON:0002241;2.81e-11;1!UBERON:0000073;1.08e-09;53!UBERON:0002616;1.08e-09;53!UBERON:0001872;6.96e-09;5!UBERON:0002021;6.96e-09;5!UBERON:0000955;5.21e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,9.08e-41,6;UBERON:0002619,2.94e-33,22;UBERON:0001870,5.53e-30,3;UBERON:0000956,2.67e-29,25;UBERON:0000203,2.67e-29,25;UBERON:0001950,8.08e-29,20;UBERON:0001869,3.11e-28,32;UBERON:0002780,1.22e-26,41;UBERON:0001890,1.22e-26,41;UBERON:0003080,1.22e-26,41;UBERON:0006240,1.22e-26,41;UBERON:0001893,1.52e-26,34;UBERON:0002791,7.39e-23,32;UBERON:0003528,1.73e-21,34;UBERON:0002020,1.73e-21,34;UBERON:0002702,9.53e-21,2;UBERON:0000073,2.23e-20,53;UBERON:0002616,2.23e-20,53;UBERON:0001049,3.19e-19,56;UBERON:0005068,3.19e-19,56;UBERON:0006241,3.19e-19,56;UBERON:0007135,3.19e-19,56;UBERON:0003056,1.52e-17,61;UBERON:0000955,2.33e-15,68;UBERON:0006238,2.33e-15,68;UBERON:0010371,7.00e-14,104;UBERON:0001017,1.06e-12,81;UBERON:0003075,1.06e-12,82;UBERON:0007284,1.06e-12,82;UBERON:0002346,4.82e-12,86;UBERON:0003112,1.97e-11,1;UBERON:0011158,1.97e-11,1;UBERON:0003128,1.97e-11,1;UBERON:0001703,1.97e-11,1;UBERON:0002241,1.97e-11,1;UBERON:0004761,1.97e-11,1;UBERON:0009617,1.97e-11,1;UBERON:0001016,2.66e-11,89;UBERON:0007190,3.63e-11,1;UBERON:0002581,4.01e-11,1;UBERON:0010314,7.81e-09,132;UBERON:0002021,8.84e-09,5;UBERON:0001872,9.57e-09,5;UBERON:0004121,1.43e-07,171;UBERON:0000924,1.43e-07,171;UBERON:0006601,1.43e-07,171;UBERON:0007023,2.92e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,1.72371686620732,0,0.173624994933292,0.885741385813839,0.60298219312704,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01297273529406,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,1.001527445652,0,0.221858103073705,0.18628920882415,0.138348634936231,0,0,0,0,1.87333962322753,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.899209151350433,1.41696576325585,0.798169295285756,0.205116364240755,1.00828678488687,0.899044282034833,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2156765231311,0,1.03343398250592,0.760989722326882,0,0,0,0,0,0.535701835878287,1.68141861109412,0,0.682986574053893,0,0,0,0.203909198930495,1.05236437700559,0,0,0,0.942693539496011,0,0.913158720509496,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33939463462106,0.795803100645473,0,0,0.659643100472575,6.18947658623362,0,0.218559560503957,2.35158648180761,0,3.53514820652439,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,1.72371686620732,0,0.173624994933292,0.885741385813839,0.60298219312704,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01297273529406,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,1.001527445652,0,0.221858103073705,0.18628920882415,0.138348634936231,0,0,0,0,1.87333962322753,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.899209151350433,1.41696576325585,0.798169295285756,0.205116364240755,1.00828678488687,0.899044282034833,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2156765231311,0,1.03343398250592,0.760989722326882,0,0,0,0,0,0.535701835878287,1.68141861109412,0,0.682986574053893,0,0,0,0.203909198930495,1.05236437700559,0,0,0,0.942693539496011,0,0.913158720509496,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33939463462106,0.795803100645473,0,0,0.659643100472575,6.18947658623362,0,0.218559560503957,2.35158648180761,0,3.53514820652439,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@LHFPL5 | |||
}} | }} |
Latest revision as of 11:43, 18 September 2015
Short description: | p1@LHFPL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LHFPL5_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000360215, NM_182548, uc003olg.1_5end |
EntrezGene: | LHFPL5 |
HGNC: | 21253 |
UniProt: | Q8TAF8B3KX66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.47e-21 | 2 |
peptide hormone secreting cell | 9.57e-12 | 1 |
enteroendocrine cell | 9.57e-12 | 1 |
type D enteroendocrine cell | 9.57e-12 | 1 |
somatostatin secreting cell | 9.57e-12 | 1 |
pancreatic D cell | 9.57e-12 | 1 |
progenitor cell of endocrine pancreas | 9.57e-12 | 1 |
keratinocyte | 4.87e-09 | 5 |
stratified squamous epithelial cell | 1.13e-07 | 6 |
keratin accumulating cell | 1.13e-07 | 6 |
stratified epithelial cell | 1.13e-07 | 6 |
keratinizing barrier epithelial cell | 1.13e-07 | 6 |
epithelial fate stem cell | 1.13e-07 | 6 |
stratified epithelial stem cell | 1.13e-07 | 6 |
surface ectodermal cell | 1.13e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.57e-12 | 1 |