FFCP PHASE1:Hg19::chr6:86159765..86159820,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:86159765..86159820,+
|short_description=p1@NT5E
|description=CAGE_peak_1_at_NT5E_5end
|association_with_transcript=0bp_to_ENST00000257770,ENST00000369646_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4907 | |EntrezGene=4907 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8021 | |HGNC=8021 | ||
|TSSclassifier=strong | |||
|UniProt=P21589,Q96B60 | |UniProt=P21589,Q96B60 | ||
|association_with_transcript=0bp_to_ENST00000257770,ENST00000369646_5end | |||
|cluster_id=chr6:86159765..86159820,+ | |||
|coexpression_cluster_id=C2870 | |||
|description=CAGE_peak_1_at_NT5E_5end | |||
|id=chr6:86159765..86159820,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.70e-30!180;CL:0000220!4.44e-22!246;CL:0002321!3.26e-21!248;CL:0000222!9.04e-20!119;CL:0000057!1.27e-17!75;CL:0000680!4.19e-16!57;CL:0000056!4.19e-16!57;CL:0000355!4.19e-16!57;CL:0000192!1.06e-14!42;CL:0000514!1.06e-14!42;CL:0000359!1.27e-14!32;CL:0000187!1.87e-14!54;CL:0000183!5.47e-14!59;CL:0002371!1.41e-11!591;CL:0000393!2.44e-11!60;CL:0000211!2.44e-11!60;CL:0000548!1.50e-10!679;CL:0000004!1.50e-10!679;CL:0000255!1.50e-10!679;CL:0000012!6.66e-10!682;CL:0000144!1.12e-09!625;CL:0002620!1.38e-08!23;CL:0000499!1.59e-07!27;CL:0000066!1.80e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.30e-14;32!CL:0000192;9.47e-11;43!CL:0002620;1.23e-08;23!CL:0000499;4.78e-08;28!CL:0000187;7.17e-08;55!CL:0000134;1.51e-07;55!CL:0000057;1.80e-07;73!CL:0002320;4.09e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.27e-21,250;CL:0000222,5.80e-20,121;CL:0000057,2.34e-18,76;CL:0000680,4.27e-16,58;CL:0000056,4.27e-16,58;CL:0000355,4.27e-16,58;CL:0000359,1.06e-14,32;CL:0000192,1.21e-14,43;CL:0000514,1.21e-14,43;CL:0000187,1.91e-14,55;CL:0000393,3.99e-11,61;CL:0000211,3.99e-11,61;CL:0002620,1.25e-08,23;CL:0000499,4.83e-08,28;CL:0000066,2.29e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;9.47e-11;43!CL:0000355;1.77e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!8.06e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.49e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.79e-24!83;UBERON:0002329!4.79e-24!83;UBERON:0003077!4.79e-24!83;UBERON:0003059!4.79e-24!83;UBERON:0007282!4.79e-24!83;UBERON:0009618!4.79e-24!83;UBERON:0007285!4.79e-24!83;UBERON:0005256!9.49e-23!143;UBERON:0000486!1.68e-21!82;UBERON:0002049!3.50e-19!79;UBERON:0007798!3.50e-19!79;UBERON:0004290!5.69e-19!70;UBERON:0000475!1.59e-17!365;UBERON:0002100!3.09e-17!216;UBERON:0000055!3.65e-16!69;UBERON:0000119!5.03e-16!312;UBERON:0001981!2.22e-15!60;UBERON:0007500!2.22e-15!60;UBERON:0004537!2.22e-15!60;UBERON:0006965!2.22e-15!60;UBERON:0003914!2.70e-15!118;UBERON:0001637!3.17e-15!42;UBERON:0003509!3.17e-15!42;UBERON:0004572!3.17e-15!42;UBERON:0000483!3.53e-15!309;UBERON:0000490!7.26e-15!138;UBERON:0001134!8.45e-15!61;UBERON:0002036!8.45e-15!61;UBERON:0003082!8.45e-15!61;UBERON:0002385!1.78e-14!63;UBERON:0001015!1.78e-14!63;UBERON:0000383!1.78e-14!63;UBERON:0000481!3.22e-14!347;UBERON:0004872!5.37e-14!84;UBERON:0004573!5.97e-13!33;UBERON:0004571!5.97e-13!33;UBERON:0004535!7.42e-13!110;UBERON:0003102!8.47e-13!95;UBERON:0003104!8.95e-13!238;UBERON:0009142!8.95e-13!238;UBERON:0000477!2.35e-12!286;UBERON:0000467!3.67e-12!625;UBERON:0000480!5.45e-12!626;UBERON:0001009!5.71e-12!113;UBERON:0000468!1.59e-11!659;UBERON:0004111!2.84e-09!241;UBERON:0002199!1.26e-08!45;UBERON:0002416!1.26e-08!45;UBERON:0002097!9.08e-08!40;UBERON:0000923!3.30e-07!604;UBERON:0005291!3.30e-07!604;UBERON:0006598!3.30e-07!604;UBERON:0002532!3.30e-07!604;UBERON:0002050!3.44e-07!605;UBERON:0005423!3.44e-07!605;UBERON:0000947!3.45e-07!21;UBERON:0010191!3.45e-07!21;UBERON:0000926!9.42e-07!448;UBERON:0004120!9.42e-07!448;UBERON:0006603!9.42e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.20e-12;33!UBERON:0004571;6.20e-12;33!UBERON:0001637;5.73e-11;42!UBERON:0003509;5.73e-11;42!UBERON:0004572;5.73e-11;42!UBERON:0007500;9.67e-09;56!UBERON:0001981;9.67e-09;56!UBERON:0004537;9.67e-09;56!UBERON:0002049;1.28e-08;75!UBERON:0007798;1.28e-08;75!UBERON:0000055;1.95e-08;65!UBERON:0003914;1.26e-07;74!UBERON:0000075;1.99e-07;16!UBERON:0000947;3.21e-07;21!UBERON:0010191;3.21e-07;21 | |||
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| ||
|short_description=p1@NT5E | |||
}} | }} |
Latest revision as of 01:06, 20 September 2015
Short description: | p1@NT5E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NT5E_5end |
Coexpression cluster: | C2870_Smooth_leiomyoma_giant_Synoviocyte_Urothelial_Myoblast_mesenchymal |
Association with transcript: | 0bp_to_ENST00000257770, ENST00000369646_5end |
EntrezGene: | NT5E |
HGNC: | 8021 |
UniProt: | P21589Q96B60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.27e-21 | 250 |
mesodermal cell | 5.80e-20 | 121 |
fibroblast | 2.34e-18 | 76 |
muscle precursor cell | 4.27e-16 | 58 |
myoblast | 4.27e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-16 | 58 |
vascular associated smooth muscle cell | 1.06e-14 | 32 |
smooth muscle cell | 1.21e-14 | 43 |
smooth muscle myoblast | 1.21e-14 | 43 |
muscle cell | 1.91e-14 | 55 |
electrically responsive cell | 3.99e-11 | 61 |
electrically active cell | 3.99e-11 | 61 |
skin fibroblast | 1.25e-08 | 23 |
stromal cell | 4.83e-08 | 28 |
epithelial cell | 2.29e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.49e-07 | 14 |