FFCP PHASE1:Hg19::chr6:86195012..86195030,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:86195012..86195030,+
|short_description=p8@NT5E
|description=CAGE_peak_8_at_NT5E_5end
|association_with_transcript=-84bp_to_ENST00000437581_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4907 | |EntrezGene=4907 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8021 | |HGNC=8021 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_ENST00000437581_5end | |||
|cluster_id=chr6:86195012..86195030,+ | |||
|coexpression_cluster_id=C1981 | |||
|description=CAGE_peak_8_at_NT5E_5end | |||
|id=chr6:86195012..86195030,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.06e-19!180;CL:0000057!1.40e-12!75;CL:0000680!2.32e-12!57;CL:0000056!2.32e-12!57;CL:0000355!2.32e-12!57;CL:0002371!9.88e-12!591;CL:0000220!1.64e-11!246;CL:0000359!1.93e-11!32;CL:0002321!4.09e-11!248;CL:0000144!5.10e-11!625;CL:0000187!9.92e-11!54;CL:0000192!1.55e-10!42;CL:0000514!1.55e-10!42;CL:0000548!1.82e-10!679;CL:0000004!1.82e-10!679;CL:0000255!1.82e-10!679;CL:0000012!5.00e-10!682;CL:0000222!1.18e-09!119;CL:0000183!3.85e-09!59;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0000499!1.07e-07!27;CL:0000003!2.60e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000499;1.76e-13;28!CL:0000359;1.70e-08;32!CL:0000134;6.13e-08;55!CL:0000723;8.48e-08;61!CL:0002559;1.25e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,1.79e-13,28;CL:0000057,9.56e-11,76;CL:0000048,1.29e-09,427;CL:0000723,1.41e-09,433;CL:0000034,5.93e-09,441;CL:0000359,1.10e-08,32;CL:0002559,1.35e-07,5;CL:0000680,7.88e-07,58;CL:0000056,7.88e-07,58;CL:0000355,7.88e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.09e-08!14;DOID:120!1.54e-07!27;DOID:193!2.64e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.43e-11;14!DOID:120;5.55e-09;27!DOID:193;4.37e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.29e-11,14;DOID:120,5.04e-09,27;DOID:193,4.01e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.96e-19!83;UBERON:0002329!2.96e-19!83;UBERON:0003077!2.96e-19!83;UBERON:0003059!2.96e-19!83;UBERON:0007282!2.96e-19!83;UBERON:0009618!2.96e-19!83;UBERON:0007285!2.96e-19!83;UBERON:0000486!3.26e-15!82;UBERON:0004290!5.26e-15!70;UBERON:0005256!6.93e-15!143;UBERON:0001637!1.70e-12!42;UBERON:0003509!1.70e-12!42;UBERON:0004572!1.70e-12!42;UBERON:0001134!2.61e-11!61;UBERON:0002036!2.61e-11!61;UBERON:0003082!2.61e-11!61;UBERON:0002385!4.63e-11!63;UBERON:0001015!4.63e-11!63;UBERON:0000383!4.63e-11!63;UBERON:0002100!1.18e-10!216;UBERON:0004573!2.32e-10!33;UBERON:0004571!2.32e-10!33;UBERON:0002049!2.97e-10!79;UBERON:0007798!2.97e-10!79;UBERON:0000490!8.58e-10!138;UBERON:0001981!1.33e-09!60;UBERON:0007500!1.33e-09!60;UBERON:0004537!1.33e-09!60;UBERON:0006965!1.33e-09!60;UBERON:0004872!2.35e-09!84;UBERON:0003102!2.93e-09!95;UBERON:0000055!3.06e-09!69;UBERON:0000475!5.35e-09!365;UBERON:0000119!2.62e-08!312;UBERON:0000483!4.26e-08!309;UBERON:0002199!2.27e-07!45;UBERON:0002416!2.27e-07!45;UBERON:0003914!2.62e-07!118;UBERON:0000481!3.93e-07!347;UBERON:0004535!5.42e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;9.80e-10;9!UBERON:0004573;5.96e-09;33!UBERON:0004571;5.96e-09;33!UBERON:0002118;1.02e-07;5!UBERON:0002073;1.25e-07;5!UBERON:0001637;3.83e-07;42!UBERON:0003509;3.83e-07;42!UBERON:0004572;3.83e-07;42!UBERON:0000075;4.03e-07;16!UBERON:0002384;9.73e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.27e-12,83;UBERON:0007524,6.93e-12,73;UBERON:0002329,1.24e-11,71;UBERON:0003059,1.24e-11,71;UBERON:0007282,1.24e-11,71;UBERON:0004290,1.24e-11,71;UBERON:0009618,1.24e-11,71;UBERON:0003077,2.39e-11,72;UBERON:0007285,2.39e-11,72;UBERON:0002067,7.50e-10,9;UBERON:0004016,7.50e-10,9;UBERON:0010083,7.50e-10,9;UBERON:0007503,8.35e-10,78;UBERON:0001637,1.67e-09,42;UBERON:0003509,1.67e-09,42;UBERON:0004572,1.67e-09,42;UBERON:0004573,1.69e-09,33;UBERON:0004571,1.69e-09,33;UBERON:0002118,1.20e-07,5;UBERON:0002073,1.35e-07,5;UBERON:0005086,1.35e-07,5;UBERON:0003102,1.58e-07,99;UBERON:0000075,7.47e-07,16;UBERON:0000490,9.22e-07,148 | |||
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| ||
|short_description=p8@NT5E | |||
}} | }} |
Latest revision as of 01:12, 20 September 2015
Short description: | p8@NT5E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NT5E_5end |
Coexpression cluster: | C1981_leiomyoma_Synoviocyte_Smooth_tenocyte_mesenchymal_Myoblast_meningioma |
Association with transcript: | -84bp_to_ENST00000437581_5end |
EntrezGene: | NT5E |
HGNC: | 8021 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 1.79e-13 | 28 |
fibroblast | 9.56e-11 | 76 |
multi fate stem cell | 1.29e-09 | 427 |
somatic stem cell | 1.41e-09 | 433 |
stem cell | 5.93e-09 | 441 |
vascular associated smooth muscle cell | 1.10e-08 | 32 |
hair follicle cell | 1.35e-07 | 5 |
muscle precursor cell | 7.88e-07 | 58 |
myoblast | 7.88e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.88e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.27e-12 | 83 |
dense mesenchyme tissue | 6.93e-12 | 73 |
somite | 1.24e-11 | 71 |
presomitic mesoderm | 1.24e-11 | 71 |
presumptive segmental plate | 1.24e-11 | 71 |
dermomyotome | 1.24e-11 | 71 |
trunk paraxial mesoderm | 1.24e-11 | 71 |
paraxial mesoderm | 2.39e-11 | 72 |
presumptive paraxial mesoderm | 2.39e-11 | 72 |
dermis | 7.50e-10 | 9 |
dermatome | 7.50e-10 | 9 |
future dermis | 7.50e-10 | 9 |
epithelial vesicle | 8.35e-10 | 78 |
artery | 1.67e-09 | 42 |
arterial blood vessel | 1.67e-09 | 42 |
arterial system | 1.67e-09 | 42 |
systemic artery | 1.69e-09 | 33 |
systemic arterial system | 1.69e-09 | 33 |
right ovary | 1.20e-07 | 5 |
hair follicle | 1.35e-07 | 5 |
hair follicle placode | 1.35e-07 | 5 |
surface structure | 1.58e-07 | 99 |
subdivision of skeletal system | 7.47e-07 | 16 |
unilaminar epithelium | 9.22e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.29e-11 | 14 |
female reproductive organ cancer | 5.04e-09 | 27 |
reproductive organ cancer | 4.01e-08 | 29 |