FFCP PHASE1:Hg19::chr7:107332334..107332350,+: Difference between revisions
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|id=chr7:107332334..107332350,+
|short_description=p2@SLC26A4
|description=CAGE_peak_2_at_SLC26A4_5end
|association_with_transcript=0bp_to_ENST00000477350,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5172 | |EntrezGene=5172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8818 | |HGNC=8818 | ||
|TSSclassifier=strong | |||
|UniProt=F5H104,B7Z6M6 | |UniProt=F5H104,B7Z6M6 | ||
|association_with_transcript=0bp_to_ENST00000477350,ENST00000541474,ENST00000544569,uc011kmb.1,uc011kmc.1_5end | |||
|cluster_id=chr7:107332334..107332350,+ | |||
|coexpression_cluster_id=C1151 | |||
|description=CAGE_peak_2_at_SLC26A4_5end | |||
|id=chr7:107332334..107332350,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.23e-13!24;CL:0000222!2.70e-10!119;CL:0005020!4.37e-09!6;CL:0002138!4.37e-09!6;CL:0005022!4.37e-09!6;CL:0000115!5.17e-08!35;CL:0002144!2.50e-07!3;CL:0000071!3.07e-07!18;CL:0002546!3.07e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002138;9.52e-21;6!CL:0002540;6.94e-10;6!CL:0002139;3.11e-09;24!CL:0002602;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.02e-20,6;CL:0002138,1.02e-20,6;CL:0005022,1.02e-20,6;CL:0002540,8.11e-10,6;CL:0002139,3.18e-09,24;CL:0002602,5.74e-08,2 | |||
|ontology_enrichment_development_v019=CL:0005022;9.52e-21;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.97e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.84e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.66e-16!79;UBERON:0007798!2.66e-16!79;UBERON:0004535!4.10e-10!110;UBERON:0000055!6.21e-10!69;UBERON:0002200!7.66e-10!11;UBERON:0006876!7.66e-10!11;UBERON:0005284!1.09e-09!5;UBERON:0001009!1.29e-09!113;UBERON:0002465!2.70e-09!10;UBERON:0001915!2.50e-07!3;UBERON:0001982!2.50e-07!3;UBERON:0001986!3.07e-07!18;UBERON:0004638!3.07e-07!18;UBERON:0004852!3.07e-07!18;UBERON:0002385!4.88e-07!63;UBERON:0001015!4.88e-07!63;UBERON:0000383!4.88e-07!63;UBERON:0000914!5.56e-07!83;UBERON:0002329!5.56e-07!83;UBERON:0003077!5.56e-07!83;UBERON:0003059!5.56e-07!83;UBERON:0007282!5.56e-07!83;UBERON:0009618!5.56e-07!83;UBERON:0007285!5.56e-07!83;UBERON:0000490!7.58e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;9.94e-16;8!UBERON:0004536;9.94e-16;8!UBERON:0006558;9.94e-16;8!UBERON:0002465;1.04e-12;10!UBERON:0002405;2.11e-12;27!UBERON:0011135;1.24e-11;5!UBERON:0002216;1.24e-11;5!UBERON:0011134;1.24e-11;5!UBERON:0002209;1.24e-11;5!UBERON:0002213;1.24e-11;5!UBERON:0007844;1.24e-11;5!UBERON:0011138;1.24e-11;5!UBERON:0001130;1.24e-11;5!UBERON:0001066;1.24e-11;5!UBERON:0001468;1.24e-11;5!UBERON:0004765;1.73e-08;26!UBERON:0006444;7.27e-08;2!UBERON:0001995;7.27e-08;2!UBERON:0004715;7.27e-08;2!UBERON:0004905;1.33e-07;8!UBERON:0000982;1.33e-07;8!UBERON:0004770;1.33e-07;8!UBERON:0002193;1.78e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.05e-15,8;UBERON:0004536,1.05e-15,8;UBERON:0006558,1.05e-15,8;UBERON:0002465,1.09e-12,10;UBERON:0011135,9.77e-12,5;UBERON:0002216,9.77e-12,5;UBERON:0011134,9.77e-12,5;UBERON:0002209,9.77e-12,5;UBERON:0002213,9.77e-12,5;UBERON:0005856,9.77e-12,5;UBERON:0005866,9.77e-12,5;UBERON:0005863,9.77e-12,5;UBERON:0007844,9.77e-12,5;UBERON:0011138,9.77e-12,5;UBERON:0001130,9.77e-12,5;UBERON:0001066,9.77e-12,5;UBERON:0001468,9.77e-12,5;UBERON:0006444,5.74e-08,2;UBERON:0001995,5.74e-08,2;UBERON:0004715,5.74e-08,2;UBERON:0004905,1.15e-07,8;UBERON:0000982,1.15e-07,8;UBERON:0004770,1.15e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,1.65698687863958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,1.5905718941022,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,3.66093086322254,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0.622422070799533,0,0,0.151357427644931,0.576175924479999,0,0.936480230490962,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.352226082707465,2.88732895522148,2.77791307545966,5.13686211033415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,1.10007428731425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,5.69656549769445,0,0,0,0,0.902838299183157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0.356128142586949,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0.372158369359667,1.58189712359363,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,5.34463506122329,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,15.3416434272822,1.0062716070103,0.889811221596536,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,1.20008329398946,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0.253663240775627,0,0,0,0,0,0,0.336283722218824,0,0,0,0,1.54339208493677,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0.606351566874658,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p2@SLC26A4 | |||
}} | }} |
Latest revision as of 01:49, 25 September 2015
Short description: | p2@SLC26A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC26A4_5end |
Coexpression cluster: | C1151_mesenchymal_Fibroblast_Nucleus_fibrosarcoma_Lymphatic_Endothelial_anaplastic |
Association with transcript: | 0bp_to_ENST00000477350, ENST00000541474, ENST00000544569, uc011kmb.1, uc011kmc.1_5end |
EntrezGene: | SLC26A4 |
HGNC: | 8818 |
UniProt: | F5H104B7Z6M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.02e-20 | 6 |
endothelial cell of lymphatic vessel | 1.02e-20 | 6 |
vascular lymphangioblast | 1.02e-20 | 6 |
mesenchymal stem cell of the bone marrow | 8.11e-10 | 6 |
endothelial cell of vascular tree | 3.18e-09 | 24 |
annulus pulposus cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.05e-15 | 8 |
lymph vasculature | 1.05e-15 | 8 |
lymphatic part of lymphoid system | 1.05e-15 | 8 |
lymphoid system | 1.09e-12 | 10 |
intervertebral cartilage | 9.77e-12 | 5 |
symphysis | 9.77e-12 | 5 |
nonsynovial joint | 9.77e-12 | 5 |
fibrous joint | 9.77e-12 | 5 |
cartilaginous joint | 9.77e-12 | 5 |
developing mesenchymal condensation | 9.77e-12 | 5 |
pre-cartilage condensation | 9.77e-12 | 5 |
cartilaginous condensation | 9.77e-12 | 5 |
cartilage element | 9.77e-12 | 5 |
post-cranial axial skeletal system | 9.77e-12 | 5 |
vertebral column | 9.77e-12 | 5 |
intervertebral disk | 9.77e-12 | 5 |
intervertebral joint | 9.77e-12 | 5 |
annulus fibrosus | 5.74e-08 | 2 |
fibrocartilage | 5.74e-08 | 2 |
annulus fibrosus disci intervertebralis | 5.74e-08 | 2 |
articulation | 1.15e-07 | 8 |
skeletal joint | 1.15e-07 | 8 |
articular system | 1.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.84e-14 | 1 |