FFCP PHASE1:Hg19::chr7:134143812..134143835,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:134143812..134143835,-
|short_description=p3@AKR1B1
|description=CAGE_peak_3_at_AKR1B1_5end
|association_with_transcript=14bp_to_ENST00000426422_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=231 | |EntrezGene=231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=381 | |HGNC=381 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEF9 | |UniProt=E9PEF9 | ||
|association_with_transcript=14bp_to_ENST00000426422_5end | |||
|cluster_id=chr7:134143812..134143835,- | |||
|description=CAGE_peak_3_at_AKR1B1_5end | |||
|id=chr7:134143812..134143835,- | |||
|ontology_enrichment_celltype=CL:0000055!2.69e-17!180;CL:0002321!5.90e-11!248;CL:0000220!2.27e-10!246;CL:0000222!5.69e-10!119;CL:0000393!3.22e-09!60;CL:0000211!3.22e-09!60;CL:0000183!3.36e-09!59;CL:0000133!5.75e-09!59;CL:0000680!2.13e-08!57;CL:0000056!2.13e-08!57;CL:0000355!2.13e-08!57;CL:0000187!4.71e-08!54;CL:0000333!6.26e-08!41;CL:0000192!4.89e-07!42;CL:0000514!4.89e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.80e-10,250;CL:0000222,1.12e-09,121;CL:0000133,3.12e-09,59;CL:0000393,3.98e-09,61;CL:0000211,3.98e-09,61;CL:0000680,2.69e-08,58;CL:0000056,2.69e-08,58;CL:0000355,2.69e-08,58;CL:0000333,4.04e-08,41;CL:0000187,6.08e-08,55;CL:0000192,5.99e-07,43;CL:0000514,5.99e-07,43;CL:0000221,6.42e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.30e-11!69;UBERON:0000119!1.02e-10!312;UBERON:0000483!1.43e-10!309;UBERON:0000481!2.69e-10!347;UBERON:0004290!4.12e-10!70;UBERON:0000477!2.36e-09!286;UBERON:0000475!2.88e-09!365;UBERON:0001134!2.91e-09!61;UBERON:0002036!2.91e-09!61;UBERON:0003082!2.91e-09!61;UBERON:0000914!3.86e-09!83;UBERON:0002329!3.86e-09!83;UBERON:0003077!3.86e-09!83;UBERON:0003059!3.86e-09!83;UBERON:0007282!3.86e-09!83;UBERON:0009618!3.86e-09!83;UBERON:0007285!3.86e-09!83;UBERON:0004872!1.08e-08!84;UBERON:0002385!1.40e-08!63;UBERON:0001015!1.40e-08!63;UBERON:0000383!1.40e-08!63;UBERON:0000486!2.34e-08!82;UBERON:0000468!2.62e-08!659;UBERON:0000025!2.84e-08!194;UBERON:0000922!3.10e-08!612;UBERON:0005256!6.19e-08!143;UBERON:0003914!7.29e-08!118;UBERON:0000064!9.68e-08!219;UBERON:0004111!1.31e-07!241;UBERON:0000480!1.73e-07!626;UBERON:0000467!2.64e-07!625;UBERON:0007100!3.51e-07!27;UBERON:0001637!3.94e-07!42;UBERON:0003509!3.94e-07!42;UBERON:0004572!3.94e-07!42;UBERON:0002050!6.82e-07!605;UBERON:0005423!6.82e-07!605;UBERON:0000923!7.21e-07!604;UBERON:0005291!7.21e-07!604;UBERON:0006598!7.21e-07!604;UBERON:0002532!7.21e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.12e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,8.59e-12,68;UBERON:0007503,6.63e-11,78;UBERON:0000119,7.23e-11,309;UBERON:0000483,1.03e-10,306;UBERON:0003077,4.16e-10,72;UBERON:0007285,4.16e-10,72;UBERON:0002329,6.34e-10,71;UBERON:0003059,6.34e-10,71;UBERON:0007282,6.34e-10,71;UBERON:0004290,6.34e-10,71;UBERON:0009618,6.34e-10,71;UBERON:0007524,1.34e-09,73;UBERON:0003104,1.89e-09,160;UBERON:0009142,1.89e-09,160;UBERON:0001134,3.57e-09,62;UBERON:0002036,3.57e-09,62;UBERON:0003082,3.57e-09,62;UBERON:0000025,4.73e-09,192;UBERON:0004872,5.37e-09,83;UBERON:0003914,1.09e-08,117;UBERON:0002385,2.15e-08,64;UBERON:0001015,2.15e-08,64;UBERON:0000383,2.15e-08,64;UBERON:0004111,6.91e-08,240;UBERON:0000486,8.08e-08,83;UBERON:0001637,2.78e-07,42;UBERON:0003509,2.78e-07,42;UBERON:0004572,2.78e-07,42;UBERON:0007100,3.94e-07,27;UBERON:0004573,8.94e-07,33;UBERON:0004571,8.94e-07,33 | |||
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| ||
|short_description=p3@AKR1B1 | |||
}} | }} |
Latest revision as of 11:10, 16 September 2015
Short description: | p3@AKR1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AKR1B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000426422_5end |
EntrezGene: | AKR1B1 |
HGNC: | 381 |
UniProt: | E9PEF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.80e-10 | 250 |
mesodermal cell | 1.12e-09 | 121 |
neurectodermal cell | 3.12e-09 | 59 |
electrically responsive cell | 3.98e-09 | 61 |
electrically active cell | 3.98e-09 | 61 |
muscle precursor cell | 2.69e-08 | 58 |
myoblast | 2.69e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.69e-08 | 58 |
migratory neural crest cell | 4.04e-08 | 41 |
muscle cell | 6.08e-08 | 55 |
smooth muscle cell | 5.99e-07 | 43 |
smooth muscle myoblast | 5.99e-07 | 43 |
ectodermal cell | 6.42e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
compound organ | 8.59e-12 | 68 |
epithelial vesicle | 6.63e-11 | 78 |
cell layer | 7.23e-11 | 309 |
epithelium | 1.03e-10 | 306 |
paraxial mesoderm | 4.16e-10 | 72 |
presumptive paraxial mesoderm | 4.16e-10 | 72 |
somite | 6.34e-10 | 71 |
presomitic mesoderm | 6.34e-10 | 71 |
presumptive segmental plate | 6.34e-10 | 71 |
dermomyotome | 6.34e-10 | 71 |
trunk paraxial mesoderm | 6.34e-10 | 71 |
dense mesenchyme tissue | 1.34e-09 | 73 |
mesenchyme | 1.89e-09 | 160 |
entire embryonic mesenchyme | 1.89e-09 | 160 |
skeletal muscle tissue | 3.57e-09 | 62 |
striated muscle tissue | 3.57e-09 | 62 |
myotome | 3.57e-09 | 62 |
tube | 4.73e-09 | 192 |
splanchnic layer of lateral plate mesoderm | 5.37e-09 | 83 |
epithelial tube | 1.09e-08 | 117 |
muscle tissue | 2.15e-08 | 64 |
musculature | 2.15e-08 | 64 |
musculature of body | 2.15e-08 | 64 |
anatomical conduit | 6.91e-08 | 240 |
multilaminar epithelium | 8.08e-08 | 83 |
artery | 2.78e-07 | 42 |
arterial blood vessel | 2.78e-07 | 42 |
arterial system | 2.78e-07 | 42 |
primary circulatory organ | 3.94e-07 | 27 |
systemic artery | 8.94e-07 | 33 |
systemic arterial system | 8.94e-07 | 33 |