FFCP PHASE1:Hg19::chr7:27155039..27155077,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:27155039..27155077,+
|short_description=p2@ENST00000518046
|description=CAGE_peak_2_at_ENST00000518046_5end
|association_with_transcript=15bp_to_ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000518046_5end | |||
|cluster_id=chr7:27155039..27155077,+ | |||
|description=CAGE_peak_2_at_ENST00000518046_5end | |||
|id=chr7:27155039..27155077,+ | |||
|ontology_enrichment_celltype=CL:0000183!3.12e-09!59;CL:0000192!8.99e-09!42;CL:0000514!8.99e-09!42;CL:0000187!7.82e-08!54;CL:0000680!9.01e-08!57;CL:0000056!9.01e-08!57;CL:0000355!9.01e-08!57;CL:0000222!1.64e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.28e-12;2!CL:1000500;2.28e-12;2!CL:1000618;2.28e-12;2!CL:1001318;2.28e-12;2!CL:0002173;2.28e-12;2!CL:1000507;2.83e-09;10!CL:1000494;2.83e-09;10!CL:0002504;2.69e-08;3!CL:1000279;2.69e-08;3!CL:1000280;2.69e-08;3!CL:0002379;2.09e-07;1!CL:1001319;2.73e-07;1!CL:1000600;2.73e-07;1!CL:0002599;7.77e-07;1!CL:0000319;7.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.49e-12,2;CL:1000500,1.49e-12,2;CL:1000618,1.49e-12,2;CL:1001318,1.49e-12,2;CL:0002173,1.49e-12,2;CL:1000507,3.03e-09,10;CL:1000494,3.03e-09,10;CL:0002504,6.04e-08,3;CL:1000279,6.04e-08,3;CL:1000280,6.04e-08,3;CL:0002379,2.09e-07,1;CL:1001319,2.82e-07,1;CL:1000600,2.82e-07,1;CL:0002599,6.76e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.09e-07;1!DOID:3565;2.09e-07;1!DOID:3030;7.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.09e-07,1;DOID:3565,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.39e-15!216;UBERON:0009569!1.80e-13!113;UBERON:0005177!4.91e-12!107;UBERON:0000466!5.20e-12!126;UBERON:0003104!1.37e-11!238;UBERON:0009142!1.37e-11!238;UBERON:0000464!2.00e-11!104;UBERON:0000489!4.76e-11!32;UBERON:0005256!7.97e-10!143;UBERON:0003886!4.44e-09!63;UBERON:0001008!8.12e-09!45;UBERON:0002417!8.53e-09!61;UBERON:0000916!8.53e-09!61;UBERON:0002113!1.37e-08!27;UBERON:0003918!1.37e-08!27;UBERON:0005095!1.37e-08!27;UBERON:0007687!1.37e-08!27;UBERON:0000058!1.42e-08!26;UBERON:0006554!3.91e-08!44;UBERON:0003064!8.67e-08!37;UBERON:0003914!1.73e-07!118;UBERON:0001135!1.96e-07!15;UBERON:0002553!2.13e-07!70;UBERON:0004921!2.97e-07!129;UBERON:0004185!2.97e-07!129;UBERON:0000080!3.78e-07!18;UBERON:0002120!3.78e-07!18;UBERON:0004875!3.78e-07!18;UBERON:0005721!3.78e-07!18;UBERON:0005754!3.78e-07!18;UBERON:0007297!3.78e-07!18;UBERON:0002385!3.93e-07!63;UBERON:0001015!3.93e-07!63;UBERON:0000383!3.93e-07!63;UBERON:0000481!4.42e-07!347;UBERON:0005172!6.54e-07!55;UBERON:0005173!6.54e-07!55;UBERON:0001134!7.93e-07!61;UBERON:0002036!7.93e-07!61;UBERON:0003082!7.93e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;2.28e-12;2!UBERON:0003838;2.28e-12;2!UBERON:0003586;2.28e-12;2!UBERON:0005169;2.28e-12;2!UBERON:0002321;2.28e-12;2!UBERON:0005215;2.28e-12;2!UBERON:0002303;2.28e-12;2!UBERON:0002319;2.28e-12;2!UBERON:0004211;2.83e-09;10!UBERON:0009773;2.83e-09;10!UBERON:0001231;2.83e-09;10!UBERON:0004810;2.83e-09;10!UBERON:0004645;2.73e-07;1!UBERON:0004913;2.73e-07;1!UBERON:0003703;2.73e-07;1!UBERON:0001256;2.73e-07;1!UBERON:0001259;2.73e-07;1!UBERON:0001174;2.73e-07;1!UBERON:0004914;2.73e-07;1!UBERON:0000941;7.77e-07;1!UBERON:0001785;7.77e-07;1!UBERON:0002464;7.77e-07;1!UBERON:0004904;7.77e-07;1!UBERON:0001021;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.49e-12,2;UBERON:0003838,1.49e-12,2;UBERON:0003586,1.49e-12,2;UBERON:0005169,1.49e-12,2;UBERON:0002321,1.49e-12,2;UBERON:0005215,1.49e-12,2;UBERON:0002303,1.49e-12,2;UBERON:0002319,1.49e-12,2;UBERON:0004810,3.03e-09,10;UBERON:0000058,2.12e-07,19;UBERON:0004913,2.50e-07,1;UBERON:0003703,2.50e-07,1;UBERON:0001174,2.50e-07,1;UBERON:0004914,2.50e-07,1;UBERON:0004645,2.82e-07,1;UBERON:0001256,2.82e-07,1;UBERON:0001259,2.82e-07,1;UBERON:0000941,7.57e-07,1;UBERON:0001785,7.57e-07,1;UBERON:0002464,7.57e-07,1;UBERON:0004904,7.57e-07,1;UBERON:0001021,7.57e-07,1;UBERON:0003902,7.57e-07,1;UBERON:0005425,7.57e-07,1 | |||
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| ||
|short_description=p2@ENST00000518046 | |||
}} | }} |
Latest revision as of 09:00, 31 July 2015
Short description: | p2@ENST00000518046 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000518046_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000518046_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.49e-12 | 2 |
kidney interstitial cell | 1.49e-12 | 2 |
juxtaglomerular complex cell | 1.49e-12 | 2 |
renal interstitial pericyte | 1.49e-12 | 2 |
extraglomerular mesangial cell | 1.49e-12 | 2 |
kidney tubule cell | 3.03e-09 | 10 |
nephron tubule epithelial cell | 3.03e-09 | 10 |
enteric smooth muscle cell | 6.04e-08 | 3 |
smooth muscle cell of large intestine | 6.04e-08 | 3 |
smooth muscle cell of colon | 6.04e-08 | 3 |
meningothelial cell | 2.09e-07 | 1 |
bladder cell | 2.82e-07 | 1 |
lower urinary tract cell | 2.82e-07 | 1 |
smooth muscle cell of the esophagus | 6.76e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 1.49e-12 | 2 |
abdominal segment connective tissue | 1.49e-12 | 2 |
trunk connective tissue | 1.49e-12 | 2 |
interstitial tissue | 1.49e-12 | 2 |
extraglomerular mesangium | 1.49e-12 | 2 |
kidney interstitium | 1.49e-12 | 2 |
juxtaglomerular apparatus | 1.49e-12 | 2 |
mesangium | 1.49e-12 | 2 |
nephron tubule epithelium | 3.03e-09 | 10 |
duct | 2.12e-07 | 19 |
hepatopancreatic ampulla | 2.50e-07 | 1 |
extrahepatic bile duct | 2.50e-07 | 1 |
common bile duct | 2.50e-07 | 1 |
duodenal papilla | 2.50e-07 | 1 |
urinary bladder urothelium | 2.82e-07 | 1 |
wall of urinary bladder | 2.82e-07 | 1 |
mucosa of urinary bladder | 2.82e-07 | 1 |
cranial nerve II | 7.57e-07 | 1 |
cranial nerve | 7.57e-07 | 1 |
nerve trunk | 7.57e-07 | 1 |
nerve connecting eye with brain | 7.57e-07 | 1 |
nerve | 7.57e-07 | 1 |
retinal neural layer | 7.57e-07 | 1 |
presumptive neural retina | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.09e-07 | 1 |
meningioma | 2.09e-07 | 1 |