FFCP PHASE1:Hg19::chr7:35734205..35734252,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:35734205..35734252,-
|short_description=p8@HERPUD2
|description=CAGE_peak_8_at_HERPUD2_5end
|association_with_transcript=0bp_to_ENST00000438224_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64224 | |EntrezGene=64224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21915 | |HGNC=21915 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDD7 | |UniProt=C9JDD7 | ||
|association_with_transcript=0bp_to_ENST00000438224_5end | |||
|cluster_id=chr7:35734205..35734252,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_8_at_HERPUD2_5end | |||
|id=chr7:35734205..35734252,- | |||
|ontology_enrichment_celltype=CL:0000144!1.92e-08!625;CL:0002139!1.83e-07!24;CL:0000213!5.53e-07!57;CL:0000215!5.53e-07!57;CL:0000071!7.95e-07!18;CL:0002546!7.95e-07!18;CL:0000012!8.46e-07!682;CL:0002371!9.54e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000071;4.89e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.44e-09,58;CL:0000215,7.44e-09,58;CL:0000071,3.79e-08,18;CL:0002546,3.79e-08,18;CL:0000222,2.37e-07,121;CL:0000763,5.45e-07,108;CL:0000049,5.45e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002546;4.89e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.95e-07!18;UBERON:0004638!7.95e-07!18;UBERON:0004852!7.95e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.89e-08;18!UBERON:0001986;4.89e-08;18!UBERON:0004852;4.89e-08;18!UBERON:0000487;1.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.79e-08,18;UBERON:0001986,3.79e-08,18;UBERON:0004852,3.79e-08,18;UBERON:0000487,1.55e-07,22 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,0.263766978228454,0.990130823680373,0.994192127183747,0,0,0,0,0.61560529038394,0.816002764977012,0,0.572471974262113,0.958120975510189,0.502170558379211,0.764134057479513,1.06730766284929,0.550975469195755,0.786728553697808,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0.232401601740905,0.142169232487422,1.46800219667424,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0.515151135268373,0.872389432677388,1.51150377475524,0.242584061187816,1.62700325833979,0.411167888021826,0.619412741790207,1.1507695692886,1.2808035326455,0.709446689665756,1.37898272294647,1.93645405075148,0,1.12945403725563,2.45615535052061,1.34834090667051,1.22433556948361,2.24650318953266,0.639337125799041,1.64925650093358,2.39356389145958,1.70489900213078,0.290209238628584,0.56738522469114,0.622822248995575,1.50749199154046,1.0429658368404,0.65156653411535,1.21079900526674,0.368277635987565,0.316462387440884,0,0.425208599930087,0,0.44931452458598,0.450530678524519,0.16072558669708,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,1.12101712596307,0.526768169550154,0.196709770113833,0.393010762749165,1.02800749499755,0.334372990781356,0,0,0,0.445641827540694,0.294605907474837,0.443067789167242,0.270803863765016,0.128091319725675,0.520237390239513,0.164437904603676,0,0,0.444859689486181,0.802622484269139,0,0.453237370790265,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.710331756132051,0,0.604820229674197,0.802320587350522,0.579297615531196,0,0,0.383587685530591,1.0843174571537,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,0.567208902984407,1.10864698731282,1.05401742831751,8.71010852059789,0.728590576585084,0,1.29818957461873,1.21890816109487,0.930705723632056,0,0,0,1.78886166630035,0.860234595106124,2.08284300964557,0.56530794192401,0.838998872419812,0.275118041940067,0.835979866147242,0.775250277507987,0.71153252537342,2.00832367658802,2.01414658554573,1.52054421143703,0.976248230192678,2.57364156242108,3.24056779152704,2.85759130509055,2.91888184414021,2.13961812918312,0,3.79706263827252,1.09921046358244,1.31780417436063,3.87780264148325,0.436094052142534,0.993943903390637,0.506522046658319,0.264818361626438,0.573673241497627,0.354668382198357,1.12135520028461,2.1349799145941,0.49333509683432,0.311211035399766,0.808264032418128,1.14423332179421,1.66493170409425,1.72852777344,1.40592859100278,1.24864030732128,1.1409436430889,0.597794722207204,1.29177948508141,0.971237666208789,0.561803226808994,0.816616685019573,1.10550885580591,0.413303124703062,0,1.23633464639278,0.910161361938026,0,1.17835279767846,0.750711119231785,0.277064115484183,0.877955241761676,0.30648779579902,0.600952235626387,0.794025282120147,0.89694817844431,0.213557388818567,0.211931901159562,0.900273288253207,0.618315175430633,0.515281080091258,0.37223371266318,0.506328996723799,0.68205903612839,0.252433774244115,0.276149695926898,0,1.06502877754984,0.806016785821122,0.339121184620975,0.57978255948989,0.272746120590835,0.286804595389004,0.243947412259191,0.662648841607426,0.69716365721711,1.0366105501537,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.686271241194102,0.109750285408626,1.1240175325762,0.100528972411631,0.277765335475589,0,2.07986957055916,4.3299402607582,0.34779121492523,1.17408694235822,0.577465791044295,0.462985512576611,0.570762456703795,0.790204397959275,0,0.246217006087397,0.468008530278475,1.48631162288728,0,0.839910640994298,0.283550194484773,0.179117045405697,0,0.383382679165211,20.6918559916296,0.880484340132261,1.03664057770386,0.720599767084807,0.75745460055828,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,1.68196626518041,0.43596006883328,1.68678057388185,0.258543431515556,3.57656445851882,0.845302752556,0.26593811658487,1.04007436911366,0.771622122786426,2.83698264046557,0.266422179016099,0.857867961948885,0,1.64648067356154,0.65147236858747,0.710783897485092,0.791951872933429,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,2.29723871668228,0,0.289562613335158,0.61642896765115,0.537182889719687,0.784596007954691,0.394061520403854,0.431255149719035,1.15508732651774,1.01637849688985,0,0,0,1.27587750330633,1.49801404789436,0,1.24324654030811,1.34960640891054,2.50085260529839,0.542530047399471,0.831883446123229,0.535286966391485,0.788512075169673,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,0.695068915744663,0.587403472388222,0,0.413536052245775,0.862856803274467,0.74709290462411,0.303127571446259,0,0.30239029332968,0.248107807818777,0.153461973288062,0.2806600944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| ||
|short_description=p8@HERPUD2 | |||
}} | }} |
Latest revision as of 09:15, 18 September 2015
Short description: | p8@HERPUD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HERPUD2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000438224_5end |
EntrezGene: | HERPUD2 |
HGNC: | 21915 |
UniProt: | C9JDD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.44e-09 | 58 |
barrier cell | 7.44e-09 | 58 |
blood vessel endothelial cell | 3.79e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.79e-08 | 18 |
mesodermal cell | 2.37e-07 | 121 |
myeloid cell | 5.45e-07 | 108 |
common myeloid progenitor | 5.45e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.79e-08 | 18 |
endothelium | 3.79e-08 | 18 |
cardiovascular system endothelium | 3.79e-08 | 18 |
simple squamous epithelium | 1.55e-07 | 22 |