FFCP PHASE1:Hg19::chr7:40883542..40883550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:40883542..40883550,+ | |||
|coexpression_cluster_id=C1136 | |coexpression_cluster_id=C1136 | ||
|description=CAGE_peak_at_chr7:40883542..40883550,+ | |description=CAGE_peak_at_chr7:40883542..40883550,+ | ||
Latest revision as of 10:00, 31 July 2015
| Short description: | p@chr7:40883542..40883550, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr7:40883542..40883550, + |
| Coexpression cluster: | C1136_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_keratoacanthoma_Urothelial |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr7:40883542..40883550+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gingival epithelial cell | 1.01e-74 | 3 |
| sebum secreting cell | 9.40e-14 | 2 |
| epithelial cell of sweat gland | 9.40e-14 | 2 |
| epithelial cell of skin gland | 9.40e-14 | 2 |
| acinar cell of sebaceous gland | 9.40e-14 | 2 |
| epithelial cell of alimentary canal | 6.38e-12 | 20 |
| epithelial cell of Malassez | 1.10e-09 | 3 |
| general ecto-epithelial cell | 4.19e-08 | 14 |
| transitional epithelial cell | 1.80e-07 | 4 |
| urothelial cell | 1.80e-07 | 4 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| gingival epithelium | 1.01e-74 | 3 |
| epithelium of mucosa | 1.23e-28 | 8 |
| gingiva | 1.23e-28 | 8 |
| mouth mucosa | 6.07e-18 | 13 |
| skin gland | 9.40e-14 | 2 |
| epidermis gland | 9.40e-14 | 2 |
| gland of integumental system | 9.40e-14 | 2 |
| sebaceous gland | 9.40e-14 | 2 |
| skin sebaceous gland | 9.40e-14 | 2 |
| sweat gland | 9.40e-14 | 2 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| skin squamous cell carcinoma | 1.26e-25 | 1 |
| keratoacanthoma | 1.26e-25 | 1 |
| pancreas adenocarcinoma | 1.37e-13 | 2 |
| pancreatic carcinoma | 1.37e-13 | 2 |
| pancreatic ductal adenocarcinoma | 1.37e-13 | 2 |
| skin carcinoma | 1.55e-13 | 2 |
| skin cancer | 1.55e-13 | 2 |
| integumentary system cancer | 1.55e-13 | 2 |
| pancreatic cancer | 1.92e-07 | 4 |
Showing 1 to 9 of 9 entries
