FFCP PHASE1:Hg19::chr11:16633751..16633768,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:16633751..16633768,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr11:16633751..16633768,- | |||
|id=chr11:16633751..16633768,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.94e-20;2!CL:0000540;4.17e-07;6!CL:0000404;4.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.74e-19,8;CL:0000540,4.17e-07,6;CL:0000031,4.17e-07,6;CL:0000404,4.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.27e-10;1!CL:0000031;4.17e-07;6 | |||
|ontology_enrichment_disease=DOID:171!3.85e-14!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.00e-24;10!DOID:3095;4.74e-11;22!DOID:2994;4.74e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.10e-24,10;DOID:3095,4.84e-11,22;DOID:2994,4.84e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.15e-55!41;UBERON:0001890!1.15e-55!41;UBERON:0006240!1.15e-55!41;UBERON:0003080!3.64e-54!42;UBERON:0001893!2.30e-51!34;UBERON:0000073!1.17e-49!94;UBERON:0001016!1.17e-49!94;UBERON:0002791!6.31e-49!33;UBERON:0001869!5.23e-47!32;UBERON:0001049!1.65e-46!57;UBERON:0005068!1.65e-46!57;UBERON:0006241!1.65e-46!57;UBERON:0007135!1.65e-46!57;UBERON:0001017!1.55e-45!82;UBERON:0005743!3.15e-45!86;UBERON:0002020!8.96e-44!34;UBERON:0003528!8.96e-44!34;UBERON:0002346!1.36e-43!90;UBERON:0002616!1.26e-41!59;UBERON:0002619!1.48e-39!22;UBERON:0001950!1.97e-39!20;UBERON:0000955!1.31e-38!69;UBERON:0006238!1.31e-38!69;UBERON:0003056!2.85e-37!61;UBERON:0003075!6.58e-36!86;UBERON:0007284!6.58e-36!86;UBERON:0000924!1.84e-35!173;UBERON:0006601!1.84e-35!173;UBERON:0000956!2.23e-34!25;UBERON:0000203!2.23e-34!25;UBERON:0007023!1.56e-30!115;UBERON:0004121!1.00e-29!169;UBERON:0000033!2.22e-20!123;UBERON:0002420!4.16e-19!9;UBERON:0007245!4.16e-19!9;UBERON:0010009!4.16e-19!9;UBERON:0010011!4.16e-19!9;UBERON:0000454!4.16e-19!9;UBERON:0000153!5.28e-19!129;UBERON:0007811!5.28e-19!129;UBERON:0001871!2.02e-16!7;UBERON:0000200!6.04e-16!6;UBERON:0009663!4.85e-14!7;UBERON:0000369!8.61e-12!4;UBERON:0002435!8.61e-12!4;UBERON:0000204!8.61e-12!4;UBERON:0010082!8.61e-12!4;UBERON:0002308!9.35e-11!9;UBERON:0000125!9.35e-11!9;UBERON:0000025!8.99e-10!194;UBERON:0002021!2.02e-09!5;UBERON:0001872!2.46e-09!5;UBERON:0000349!2.46e-09!5;UBERON:0005383!3.94e-09!3;UBERON:0005382!3.94e-09!3;UBERON:0000064!1.83e-08!219;UBERON:0002771!2.44e-08!3;UBERON:0000923!2.49e-07!604;UBERON:0005291!2.49e-07!604;UBERON:0006598!2.49e-07!604;UBERON:0002532!2.49e-07!604;UBERON:0002050!2.72e-07!605;UBERON:0005423!2.72e-07!605;UBERON:0000483!2.73e-07!309;UBERON:0003714!2.90e-07!2;UBERON:0000119!4.02e-07!312;UBERON:0000922!4.99e-07!612;UBERON:0001873!5.71e-07!2;UBERON:0010122!5.71e-07!2;UBERON:0001876!7.20e-07!2;UBERON:0001870!7.84e-07!2;UBERON:0004111!8.77e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.97e-39;4!UBERON:0000923;1.97e-39;4!UBERON:0010316;1.97e-39;4!UBERON:0005291;1.97e-39;4!UBERON:0002050;1.26e-31;5!UBERON:0005423;1.26e-31;5!UBERON:0003714;4.90e-20;2!UBERON:0000922;1.26e-16;49!UBERON:0002114;1.45e-13;2!UBERON:0001882;1.27e-10;1!UBERON:0000941;1.27e-10;1!UBERON:0001785;1.27e-10;1!UBERON:0002464;1.27e-10;1!UBERON:0004904;1.27e-10;1!UBERON:0001021;1.27e-10;1!UBERON:0005403;1.27e-10;1!UBERON:0000369;3.14e-10;4!UBERON:0002435;3.14e-10;4!UBERON:0000204;3.14e-10;4!UBERON:0002108;1.69e-08;4!UBERON:0001016;5.56e-08;83!UBERON:0002791;7.67e-07;32!UBERON:0001869;8.86e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.45e-20,2;UBERON:0001016,3.22e-15,89;UBERON:0002114,1.16e-13,2;UBERON:0004121,3.84e-13,171;UBERON:0000924,3.84e-13,171;UBERON:0006601,3.84e-13,171;UBERON:0001017,5.12e-12,81;UBERON:0002346,1.40e-11,86;UBERON:0000941,1.10e-10,1;UBERON:0001785,1.10e-10,1;UBERON:0002464,1.10e-10,1;UBERON:0004904,1.10e-10,1;UBERON:0001021,1.10e-10,1;UBERON:0003902,1.10e-10,1;UBERON:0005425,1.10e-10,1;UBERON:0001882,1.77e-10,1;UBERON:0005403,1.77e-10,1;UBERON:0000369,3.78e-10,4;UBERON:0002435,3.78e-10,4;UBERON:0000204,3.78e-10,4;UBERON:0010082,3.78e-10,4;UBERON:0002108,1.48e-08,4;UBERON:0002791,4.62e-07,32;UBERON:0001869,4.62e-07,32;UBERON:0011216,6.43e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,3.90419561572865,1.54657762555539,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,3.99227596002388,0,0,0,0,0,0,0,19.537509096678,0,0.885741385813839,1.32656082487949,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,7.95789180239274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823040347426423,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.500763722825999,0,0,0.248385611765534,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.943595651135378,0.109209638192014,7.12876625806906,49.3173814635904,15.6159062966343,8.37967376959866,0,0,0,0,0.3062454773532,1.02766760154335,0,0.638535436228605,0.41023272848151,4.28521883576921,0.760729777106397,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0.742913430802341,0,0.206686796501184,0.697573912132975,7.65764732625507,0,0,8.61769097362141,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0.271878931907327,0.72350050919134,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,1.39086617842064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.430018749454354,0.473314686579554,0.883889372481891,5.23620828408453,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:16633751..16633768,- | |||
}} |
Latest revision as of 20:24, 23 July 2015
Short description: | p@chr11:16633751..16633768, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:16633751..16633768, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.74e-19 | 8 |
neuron | 4.17e-07 | 6 |
neuroblast | 4.17e-07 | 6 |
electrically signaling cell | 4.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.45e-20 | 2 |
nervous system | 3.22e-15 | 89 |
duodenum | 1.16e-13 | 2 |
ectoderm-derived structure | 3.84e-13 | 171 |
ectoderm | 3.84e-13 | 171 |
presumptive ectoderm | 3.84e-13 | 171 |
central nervous system | 5.12e-12 | 81 |
neurectoderm | 1.40e-11 | 86 |
cranial nerve II | 1.10e-10 | 1 |
cranial nerve | 1.10e-10 | 1 |
nerve trunk | 1.10e-10 | 1 |
nerve connecting eye with brain | 1.10e-10 | 1 |
nerve | 1.10e-10 | 1 |
retinal neural layer | 1.10e-10 | 1 |
presumptive neural retina | 1.10e-10 | 1 |
nucleus accumbens | 1.77e-10 | 1 |
ventral striatum | 1.77e-10 | 1 |
corpus striatum | 3.78e-10 | 4 |
striatum | 3.78e-10 | 4 |
ventral part of telencephalon | 3.78e-10 | 4 |
future corpus striatum | 3.78e-10 | 4 |
small intestine | 1.48e-08 | 4 |
regional part of telencephalon | 4.62e-07 | 32 |
cerebral hemisphere | 4.62e-07 | 32 |
organ system subdivision | 6.43e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.10e-24 | 10 |
germ cell and embryonal cancer | 4.84e-11 | 22 |
germ cell cancer | 4.84e-11 | 22 |