FFCP PHASE1:Hg19::chr11:44117741..44117798,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3513 | |||
|TSSclassifier=strong | |||
|UniProt=Q93063 | |||
|association_with_transcript=0bp_to_ENST00000343631,ENST00000395673,NM_000401,uc001mya.2_5end | |||
|cluster_id=chr11:44117741..44117798,+ | |||
|description=CAGE_peak_5_at_EXT2_5end | |||
|id=chr11:44117741..44117798,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.87e-31!254;CL:0002321!2.87e-20!248;CL:0000220!4.89e-20!246;CL:0000012!7.05e-13!682;CL:0000548!3.20e-12!679;CL:0000004!3.20e-12!679;CL:0000255!3.20e-12!679;CL:0002076!8.89e-12!43;CL:0000359!3.31e-10!32;CL:0000223!6.61e-10!59;CL:0000076!2.84e-09!62;CL:0000055!1.53e-08!180;CL:0000077!3.37e-07!19;CL:0000192!4.36e-07!42;CL:0000514!4.36e-07!42;CL:0000222!5.26e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.67e-12;32!CL:0002076;3.44e-10;42!CL:0002368;6.16e-08;13!CL:0002539;1.18e-07;10!CL:0000077;2.21e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.68e-22,253;CL:0002321,2.04e-15,250;CL:0000359,9.03e-13,32;CL:0002076,5.60e-12,42;CL:0000223,8.65e-10,58;CL:0000076,9.04e-10,63;CL:0002368,5.14e-08,13;CL:0000192,6.44e-08,43;CL:0000514,6.44e-08,43;CL:0002539,1.27e-07,10;CL:0000077,2.04e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.40e-17!106;DOID:14566!9.82e-16!239;DOID:0050687!1.04e-15!143;DOID:162!3.17e-14!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.17e-11,106;DOID:14566,2.65e-10,239;DOID:0050687,1.50e-09,143;DOID:162,8.05e-09,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.39e-08!238;UBERON:0009142!1.39e-08!238;UBERON:0004573!3.65e-08!33;UBERON:0004571!3.65e-08!33;UBERON:0001637!4.86e-08!42;UBERON:0003509!4.86e-08!42;UBERON:0004572!4.86e-08!42;UBERON:0004119!1.19e-07!169;UBERON:0000925!1.19e-07!169;UBERON:0006595!1.19e-07!169;UBERON:0002100!2.03e-07!216;UBERON:0000486!9.88e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.16e-11;33!UBERON:0004571;1.16e-11;33!UBERON:0001637;1.32e-09;42!UBERON:0003509;1.32e-09;42!UBERON:0004572;1.32e-09;42!UBERON:0000486;1.08e-07;12!UBERON:0004237;1.18e-07;10!UBERON:0004695;1.18e-07;10!UBERON:0002111;1.18e-07;10!UBERON:0004178;1.18e-07;10!UBERON:0005911;1.25e-07;36!UBERON:0005910;7.31e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.82e-13,42;UBERON:0003509,5.82e-13,42;UBERON:0004572,5.82e-13,42;UBERON:0004573,8.96e-13,33;UBERON:0004571,8.96e-13,33;UBERON:0007500,4.07e-08,59;UBERON:0001981,4.07e-08,59;UBERON:0004537,4.07e-08,59;UBERON:0006965,4.07e-08,59;UBERON:0004237,1.27e-07,10;UBERON:0004695,1.27e-07,10;UBERON:0002111,1.27e-07,10;UBERON:0004178,1.27e-07,10;UBERON:0000055,1.44e-07,68;UBERON:0005910,8.15e-07,6;UBERON:0000486,9.40e-07,83 | |||
|phase1_expression=0.54503513781167,0,0,0,0,1.74467704820074,0,0.631719873426831,0,3.93174298402414,1.39560233594486,0.436882744260345,0.527533956456907,0.495065411840187,0.331397375727916,7.39557661096953,4.21886169616784,10.2243412654232,9.75865597581014,0.492484232307152,0.204000691244253,0,1.71741592278634,0.821246550437305,0.502170558379211,0.382067028739756,0.246301768349837,0.236132343941038,0,0,0.309632246632152,5.51652734687356,7.228942050678,2.9580320813343,0,0,0.880801318004542,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.639312809217652,1.44575660953827,0.50133791063589,1.44846518960824,7.95285947051099,18.0054902011975,0.189069634328136,0,0.175669571386252,0.196468613246569,2.5500670180478,2.59549109949101,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0.626984899610432,0,0.35576626268671,0.33472061276467,2.41697590265488,1.52054421143703,1.22031028774085,1.10298924103761,1.62028389576352,0.17859945656816,0,0,0,0.949265659568129,0.183201743930407,0,0,5.23312862571041,1.49091585508596,1.13967460498122,1.45650098894541,2.86836620748814,1.06400514659507,0.560677600142307,0,1.48000529050296,0,0.404132016209064,0.980771418680752,0,0,0.234321431833797,1.24864030732128,0.570471821544449,0.149448680551801,0.23486899728753,0.647491777472526,0.561803226808994,0.204154171254893,0,0.413303124703062,0,0.741800787835671,0.910161361938026,0.718618141816238,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,0,0.751190294532984,1.02088964844019,2.69084453533293,0.640672166455702,0.423863802319124,2.40072876867522,0.92747276314595,1.8034837803194,1.8611685633159,5.06328996723799,3.31285817548075,1.7670364197088,0.644349290496095,0.323292113637624,3.19508633264953,0.604512589365842,1.18692414617341,13.3349988682675,9.81886034127005,8.89094245705912,0.487894824518382,1.19276791489337,0.69716365721711,0.621966330092223,0.504641701751257,3.28479623168247,4.69348596989448,0,0,0.928735856063958,0,1.65629520055781,0.505754070234305,0.723033089650446,1.43382164552112,1.30727666455444,0.949082476444386,0.808987848960987,0.392442930250692,1.92373578473195,0.738155454624648,0,0.4115740113314,0,0,0,0,0,1.10689594688802,0.171567810298526,3.07300799144152,2.24803506515239,5.42856451022807,2.68506490959736,0.325808305310325,7.27954349695705,1.44331342025273,0.34779121492523,0.117408694235822,3.17606185074362,1.85194205030644,3.04406643575357,0,0,0,0,0,6.56136837907439,22.3416230504483,10.0660319042094,6.98556477082217,6.39394664730716,7.28427090413901,0.492663237895943,0.088048434013226,0,0,0,0.063497894292169,0,1.17217447210047,0,0.308482478109971,1.20137223137567,0.285826432630578,0.112131084345361,0.87192013766656,0.2933531432838,3.10252117818667,0,0,0,0,0.514414748524284,2.83698264046557,0.266422179016099,0,0,2.46972101034231,0.65147236858747,0,4.75171123760058,4.22015127883421,6.97226766880235,2.89921674427965,0,0,0,0,0,0,0.868687840005475,1.2328579353023,0.537182889719687,0,0,0.215627574859517,0,0.76228387266739,0,0,0.670065061337395,0,0,0,0,0.49076596687656,1.50051156317903,0.271265023699736,0.415941723061614,0.892144943985809,0.788512075169673,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,1.38115775959256,1.12264037773229,0.384417447767103,3.58195074346692,0,0,0.616838775210622,0.355123450626254,0.492762936082855,2.07701771673448,0.464841513839837,0.604297247958111,17.2435564460825,1.01289087829486,0.229628896329213,0.364182336013434,1.44236856455367,3.60959690325929,1.84836809050595,0.784349769176855,2.92278449306521,1.58327443339314,0,0.170093705276516,0.431831832204279,0,0.812839312631559,0,2.80363900349542,2.49322802678617,1.79099803777743,0,0,0.769350375349168,0.328014645699706,0.650756789328606,0.515205058238611,0.366277859273374,0.330037999682352,16.0794350638928,9.1008434445113,1.6068392984416,0.290012154876366,0,0.460511024178389,0.275673144969061,0.429680979473094,0,0.0852266274161009,0.356128142586949,8.26424576804891,12.684544446097,14.0373983744043,3.54052232994425,0,6.92587163027408,2.7881490806424,4.00443654228915,3.19383618190213,6.95946393660058,10.9341289271313,5.43874569619567,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,4.70969184119538,0.179872457583315,0,0.471249609382746,4.44801459461295,1.58510321173008,9.26768603725758,0,8.52997213709495,9.50851320810799,0.272999822815972,1.1312434556297,0,1.65409603063837,11.2784625791007,18.414937180658,0.578775534266688,0,7.50768394762005,6.196469961995,1.12678241012897,0.860468113224309,0.785992328104969,7.84676313258751,0.70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| |||
|short_description=p5@EXT2 | |||
}} |
Latest revision as of 00:04, 18 September 2015
Short description: | p5@EXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EXT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343631, ENST00000395673, NM_000401, uc001mya.2_5end |
EntrezGene: | EXT2 |
HGNC: | 3513 |
UniProt: | Q93063 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.68e-22 | 253 |
embryonic cell | 2.04e-15 | 250 |
vascular associated smooth muscle cell | 9.03e-13 | 32 |
endo-epithelial cell | 5.60e-12 | 42 |
endodermal cell | 8.65e-10 | 58 |
squamous epithelial cell | 9.04e-10 | 63 |
respiratory epithelial cell | 5.14e-08 | 13 |
smooth muscle cell | 6.44e-08 | 43 |
smooth muscle myoblast | 6.44e-08 | 43 |
aortic smooth muscle cell | 1.27e-07 | 10 |
mesothelial cell | 2.04e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
artery | 5.82e-13 | 42 |
arterial blood vessel | 5.82e-13 | 42 |
arterial system | 5.82e-13 | 42 |
systemic artery | 8.96e-13 | 33 |
systemic arterial system | 8.96e-13 | 33 |
epithelial tube open at both ends | 4.07e-08 | 59 |
blood vessel | 4.07e-08 | 59 |
blood vasculature | 4.07e-08 | 59 |
vascular cord | 4.07e-08 | 59 |
blood vessel smooth muscle | 1.27e-07 | 10 |
arterial system smooth muscle | 1.27e-07 | 10 |
artery smooth muscle tissue | 1.27e-07 | 10 |
aorta smooth muscle tissue | 1.27e-07 | 10 |
vessel | 1.44e-07 | 68 |
transitional epithelium | 8.15e-07 | 6 |
multilaminar epithelium | 9.40e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.17e-11 | 106 |
disease of cellular proliferation | 2.65e-10 | 239 |
cell type cancer | 1.50e-09 | 143 |
cancer | 8.05e-09 | 235 |