FFCP PHASE1:Hg19::chr11:66084508..66084523,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18219 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCU0 | |||
|association_with_transcript=0bp_to_ENST00000311330,NM_020404,uc001ohm.1_5end | |||
|cluster_id=chr11:66084508..66084523,- | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_1_at_CD248_5end | |||
|id=chr11:66084508..66084523,- | |||
|ontology_enrichment_celltype=CL:0000055!1.72e-36!180;CL:0000057!3.83e-27!75;CL:0000183!1.94e-16!59;CL:0000680!4.54e-16!57;CL:0000056!4.54e-16!57;CL:0000355!4.54e-16!57;CL:0000187!5.22e-16!54;CL:0000393!1.43e-14!60;CL:0000211!1.43e-14!60;CL:0000192!3.04e-12!42;CL:0000514!3.04e-12!42;CL:0002620!2.20e-11!23;CL:0000048!1.18e-08!430;CL:0000136!1.76e-08!15;CL:0000723!2.36e-08!436;CL:0000359!3.17e-08!32;CL:0002334!3.27e-08!12;CL:0000034!8.03e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.73e-12;23!CL:0000057;1.69e-11;73!CL:0000134;5.31e-10;55!CL:0000187;1.03e-09;55!CL:0000192;1.66e-09;43!CL:0000723;2.86e-09;61!CL:0000048;8.97e-09;58!CL:0002320;1.26e-08;188!CL:0002334;1.32e-08;12!CL:0000393;2.06e-08;61!CL:0000211;2.06e-08;61!CL:0000349;3.38e-08;19!CL:0000359;6.22e-08;32!CL:0000136;1.53e-07;13!CL:0000034;6.21e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.65e-29,76;CL:0000680,4.00e-17,58;CL:0000056,4.00e-17,58;CL:0000355,4.00e-17,58;CL:0000187,4.68e-17,55;CL:0000393,3.49e-14,61;CL:0000211,3.49e-14,61;CL:0000192,4.59e-13,43;CL:0000514,4.59e-13,43;CL:0002620,5.79e-12,23;CL:0000048,3.44e-11,427;CL:0000723,1.22e-10,433;CL:0000034,7.36e-10,441;CL:0000136,6.84e-09,15;CL:0002334,1.32e-08,12;CL:0000359,2.79e-08,32;CL:0000349,3.37e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.66e-09;43!CL:0000355;2.40e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.37e-22!83;UBERON:0002329!2.37e-22!83;UBERON:0003077!2.37e-22!83;UBERON:0003059!2.37e-22!83;UBERON:0007282!2.37e-22!83;UBERON:0009618!2.37e-22!83;UBERON:0007285!2.37e-22!83;UBERON:0004290!2.80e-20!70;UBERON:0002385!5.90e-17!63;UBERON:0001015!5.90e-17!63;UBERON:0000383!5.90e-17!63;UBERON:0001134!1.17e-16!61;UBERON:0002036!1.17e-16!61;UBERON:0003082!1.17e-16!61;UBERON:0000486!9.11e-16!82;UBERON:0000475!2.42e-14!365;UBERON:0005256!9.13e-13!143;UBERON:0002199!1.39e-11!45;UBERON:0002416!1.39e-11!45;UBERON:0003102!2.48e-11!95;UBERON:0001013!2.74e-09!14;UBERON:0004923!5.03e-09!57;UBERON:0002097!5.18e-09!40;UBERON:0000468!1.55e-08!659;UBERON:0000481!1.71e-08!347;UBERON:0000479!2.94e-08!787;UBERON:0004872!6.90e-08!84;UBERON:0002100!2.04e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.47e-10;14!UBERON:0002384;1.95e-09;198!UBERON:0002385;9.30e-09;31!UBERON:0001015;9.30e-09;31!UBERON:0000383;9.30e-09;31!UBERON:0002199;2.18e-08;46!UBERON:0002416;2.18e-08;46!UBERON:0002097;9.67e-08;41!UBERON:0003102;1.21e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.89e-22,73;UBERON:0002329,1.37e-21,71;UBERON:0003059,1.37e-21,71;UBERON:0007282,1.37e-21,71;UBERON:0004290,1.37e-21,71;UBERON:0009618,1.37e-21,71;UBERON:0003077,1.79e-21,72;UBERON:0007285,1.79e-21,72;UBERON:0007503,6.69e-19,78;UBERON:0002385,4.56e-18,64;UBERON:0001015,4.56e-18,64;UBERON:0000383,4.56e-18,64;UBERON:0001134,9.46e-18,62;UBERON:0002036,9.46e-18,62;UBERON:0003082,9.46e-18,62;UBERON:0000486,4.15e-17,83;UBERON:0005256,2.96e-13,122;UBERON:0002199,1.23e-12,46;UBERON:0002416,1.23e-12,46;UBERON:0003104,1.49e-11,160;UBERON:0009142,1.49e-11,160;UBERON:0003102,2.13e-11,99;UBERON:0000479,1.56e-10,773;UBERON:0004923,4.21e-10,66;UBERON:0002097,6.79e-10,41;UBERON:0001013,9.57e-10,14;UBERON:0004872,2.65e-08,83;UBERON:0000490,1.83e-07,148;UBERON:0005631,5.74e-07,14;UBERON:0000158,5.74e-07,14 | |||
|phase1_expression=167.689144066724,252.63861819136,186.905539831258,112.082094155506,112.634195795677,88.9785294582376,220.37089400643,239.421832028769,623.188908884815,6.14334841253772,3.48900583986214,115.118603112601,140.587799395766,112.998680252523,95.7738415853677,38.3225333477512,41.5859224336544,49.6610861463414,48.3053470802602,13.5433163884467,24.2760822580661,11.5978246946892,4.86601178122796,3.28498620174922,24.1041868022021,0,0,0,0,0,2.94150634300544,0,0.30120591877825,0,0,0,0.293600439334847,1.66198622559563,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,2.81744470007915,0.535081656179426,0,0,0.383220493601921,0,0,2.86708872891687,3.25541726928209,0.950452044448374,2.71035214339991,2.43174561193395,3.74792179657038,1.4206635122641,5.74789597844733,1.61285394579786,1.33720097891754,7.38604459802275,107.275021178143,59.02167565392,67.3835700915405,90.7212272485261,85.7287827187371,56.4901423947212,2.3858578411533,25.3050132557371,6.42836756715661,10.4212816807405,8.87131335500573,12.5739912477804,0.364295288292542,1.85392221392215,0,0,0.26591592103773,0,0,0,0,23.2263340678654,0,0,0,0,0,0,1.06729878806013,0.66944122552934,0,0,1.22031028774085,0,0,0,0,0,0,0,1.28241220751285,0,0,0.436094052142534,292.716479548543,42.0413298726405,114.666350584247,525.771525832576,140.094010968351,105.968066426896,40.5646183772879,19.2400687765385,140.978599036094,23.1702355959863,25.1731330794726,169.520318962323,148.65338851584,66.5472866407982,229.125496393455,78.1546395515896,168.279214301328,23.3694652301092,22.8240851559065,20.0844653584215,125.14650697925,64.1195136367429,363.396772395167,161.568388590359,156.767233162605,191.133886006986,159.533227483205,31.3105171954563,53.1753709455848,116.366928503357,121.596800983992,142.516825046544,117.335924006052,19.3969033203636,360.752557370301,142.229220953166,143.477897085023,432.131178361539,122.014194618312,226.208394160062,237.298991822777,445.23196445246,109.324319790865,244.103459694059,137.982798064807,162.777579216544,712.149242588328,147.904080198176,180.92115199529,0,0,0,0.243947412259191,0.265059536642971,2.90484857173796,2.28054321033815,1.7662459561294,0,524.105933304883,430.971428589233,406.116668776293,211.751775182582,478.606096346935,0,0,0,0,0,0,0,0,0,0.738155454624648,60.3039627354817,112.771279104804,298.42768411265,0,0.982827216677626,5.90789906681404,0,0,67.4261494473205,0.109750285408626,1.1240175325762,0.100528972411631,1.574003567695,55.7132202080655,114.392826380754,20.2063878835383,6.02838105870399,56.7083993159019,0,0.462985512576611,0,0,0,0,0,0.445893486866185,0.93733833986777,0.335964256397719,0,0,0,2.30029607499127,0,0,0.207328115540772,0.144119953416961,0.75745460055828,5.58781469771088,0,0,87.2469474715797,13.0590915733221,3.90445975197093,0,95.423552777902,82.8324130783232,89.6927235590219,34.1277329600533,1680.98529550385,105.6628440695,156.371612551904,260.018592278415,94.9095211027304,56.7396528093113,83.3901420320391,163.566824744921,534.482281310571,108.667724455061,81.7597822577275,135.40433247091,37.2217380278712,9.94749944296634,3.48613383440118,26.1929236896989,0,0,0,18.4511138728519,34.4585807502342,2.85273810081437,76.2997486138142,4.9314317412092,1.79060963239896,0,0.197030760201927,0,0.513372145118994,2.54094624222463,0,2.31986643833309,3.68535783735567,0.637938751653163,0,0,0,87.724416579185,182.562240186782,66.1886657827355,106.065139380712,202.695331273576,181.515479704059,119.132819047589,173.344953443166,104.607451865753,128.306608402706,130.852442911481,131.086478833151,202.438821710633,362.036340148607,185.297448857862,1.6541442089831,0.215714200818617,1.17400313583789,192.486007868375,362.829258132884,492.593787834049,197.245707215928,175.253573494967,186.358302703561,249.615062750105,158.117539961611,204.927895536956,241.921448305335,151.433919314208,278.77190874161,151.770984313519,174.469488205697,169.66715255154,0,0,0.0920809889358963,22.5036318402629,76.8424728988346,75.7899118465471,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0,0.647747748306418,0,9.48312531403485,14.0473136679359,0,0,0.671624264166535,0,0,0.512900250232778,3.93617574839647,3.25378394664303,14.2196596073857,0,0,27.5647458238163,1.95018073810956,131.760822472211,83.9101834775619,108.758323682939,124.798487552343,26.1889487720608,114.50998102958,179.530667065815,99.9708339590864,116.186806518992,0,0.192190067365106,0,0,12.0859842817294,446.403907805848,118.496335927302,28.0310557960241,21.8245472429979,144.408876684462,30.9491445903546,0.572499546967965,82.2469996284865,107.885383829086,109.612361506199,212.90696237103,221.672395801571,236.743216456897,15.6989728039846,47.4863288019951,99.9314788239239,71.5121282238317,20.0160656757583,3.17020642346017,28.2243165680117,93.6256779052013,17.5473712534525,38.034052832432,113.15842655722,146.496027504046,277.99996688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| |||
|short_description=p1@CD248 | |||
}} |
Latest revision as of 14:04, 19 September 2015
Short description: | p1@CD248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD248_5end |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000311330, NM_020404, uc001ohm.1_5end |
EntrezGene: | CD248 |
HGNC: | 18219 |
UniProt: | Q9HCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.65e-29 | 76 |
muscle precursor cell | 4.00e-17 | 58 |
myoblast | 4.00e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.00e-17 | 58 |
muscle cell | 4.68e-17 | 55 |
electrically responsive cell | 3.49e-14 | 61 |
electrically active cell | 3.49e-14 | 61 |
smooth muscle cell | 4.59e-13 | 43 |
smooth muscle myoblast | 4.59e-13 | 43 |
skin fibroblast | 5.79e-12 | 23 |
multi fate stem cell | 3.44e-11 | 427 |
somatic stem cell | 1.22e-10 | 433 |
stem cell | 7.36e-10 | 441 |
fat cell | 6.84e-09 | 15 |
preadipocyte | 1.32e-08 | 12 |
vascular associated smooth muscle cell | 2.79e-08 | 32 |
extraembryonic cell | 3.37e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 4.89e-22 | 73 |
somite | 1.37e-21 | 71 |
presomitic mesoderm | 1.37e-21 | 71 |
presumptive segmental plate | 1.37e-21 | 71 |
dermomyotome | 1.37e-21 | 71 |
trunk paraxial mesoderm | 1.37e-21 | 71 |
paraxial mesoderm | 1.79e-21 | 72 |
presumptive paraxial mesoderm | 1.79e-21 | 72 |
epithelial vesicle | 6.69e-19 | 78 |
muscle tissue | 4.56e-18 | 64 |
musculature | 4.56e-18 | 64 |
musculature of body | 4.56e-18 | 64 |
skeletal muscle tissue | 9.46e-18 | 62 |
striated muscle tissue | 9.46e-18 | 62 |
myotome | 9.46e-18 | 62 |
multilaminar epithelium | 4.15e-17 | 83 |
trunk mesenchyme | 2.96e-13 | 122 |
integument | 1.23e-12 | 46 |
integumental system | 1.23e-12 | 46 |
mesenchyme | 1.49e-11 | 160 |
entire embryonic mesenchyme | 1.49e-11 | 160 |
surface structure | 2.13e-11 | 99 |
tissue | 1.56e-10 | 773 |
organ component layer | 4.21e-10 | 66 |
skin of body | 6.79e-10 | 41 |
adipose tissue | 9.57e-10 | 14 |
splanchnic layer of lateral plate mesoderm | 2.65e-08 | 83 |
unilaminar epithelium | 1.83e-07 | 148 |
extraembryonic membrane | 5.74e-07 | 14 |
membranous layer | 5.74e-07 | 14 |