FFCP PHASE1:Hg19::chr12:20551244..20551248,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:20551244..20551248,+ | |||
|description=CAGE_peak_at_chr12:20551244..20551248,+ | |||
|id=chr12:20551244..20551248,+ | |||
|ontology_enrichment_celltype=CL:0002150!5.94e-07!3;CL:0000861!5.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000222;3.25e-19;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.30e-19;1!UBERON:0005062;2.97e-19;4!UBERON:0007284;2.97e-19;4!UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3905;6.35e-09;9!DOID:4556;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3905,5.87e-09,9;DOID:4556,2.47e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-10!115;UBERON:0007100!2.22e-07!27;UBERON:0003978!5.21e-07!3;UBERON:0009751!5.21e-07!3;UBERON:0000946!5.21e-07!3;UBERON:0002523!5.21e-07!3;UBERON:0005983!5.21e-07!3;UBERON:0002165!5.21e-07!3;UBERON:0002062!5.21e-07!3;UBERON:0007280!5.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.64e-25;3!UBERON:0000946;2.64e-25;3!UBERON:0000989;1.30e-19;1!UBERON:0002146;1.30e-19;1!UBERON:0002134;1.30e-19;1!UBERON:0008811;1.30e-19;1!UBERON:0005208;1.30e-19;1!UBERON:0005623;1.30e-19;1!UBERON:0004145;1.30e-19;1!UBERON:0005946;1.30e-19;1!UBERON:0005965;1.30e-19;1!UBERON:0002078;1.30e-19;1!UBERON:0002081;1.72e-10;2!UBERON:0002133;1.72e-10;2!UBERON:0010313;2.82e-08;10!UBERON:0000948;4.66e-08;22!UBERON:0004151;2.05e-07;3!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3!UBERON:0007100;3.72e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.64e-25,3;UBERON:0009751,2.64e-25,3;UBERON:0000946,2.64e-25,3;UBERON:0002523,2.64e-25,3;UBERON:0005983,2.64e-25,3;UBERON:0002165,2.64e-25,3;UBERON:0002062,2.64e-25,3;UBERON:0007280,2.64e-25,3;UBERON:0002146,1.08e-19,1;UBERON:0005623,1.08e-19,1;UBERON:0000989,1.30e-19,1;UBERON:0008811,1.30e-19,1;UBERON:0006258,1.30e-19,1;UBERON:0005876,1.30e-19,1;UBERON:0004874,1.30e-19,1;UBERON:0002134,1.56e-19,1;UBERON:0005208,1.56e-19,1;UBERON:0005946,1.56e-19,1;UBERON:0005965,1.56e-19,1;UBERON:0002078,1.56e-19,1;UBERON:0004797,1.97e-11,7;UBERON:0002081,1.89e-10,2;UBERON:0002133,1.89e-10,2;UBERON:0010227,1.89e-10,2;UBERON:0010313,2.82e-08,10;UBERON:0002342,2.82e-08,10;UBERON:0005062,2.82e-08,10;UBERON:0000948,2.11e-07,24;UBERON:0005498,2.11e-07,24;UBERON:0004140,2.11e-07,24;UBERON:0009881,2.11e-07,24;UBERON:0004141,2.11e-07,24;UBERON:0003084,2.11e-07,24;UBERON:0007005,2.11e-07,24;UBERON:0004139,2.11e-07,24;UBERON:0004291,2.11e-07,24;UBERON:0004151,2.19e-07,3;UBERON:0004145,2.19e-07,3;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,1.06748995729705,0,0,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.214840489736547,0.290033387828457,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0.622079175323615,0,0.895105873378046,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.544692317594951,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,1.9351266257817,0.803982487948041,1.56019368401098,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,2.97908551215189,2.15361907373044,0.998395002494955,0.858452096273142,0.446342914883745,0.268733889946905,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,1.79287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0.570930667089935,0,0,0.144921028610825,0,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,2.48105589194647,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,1.30812099855325,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0,0,1.2679671827502,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:20551244..20551248,+ | |||
}} |
Latest revision as of 07:26, 24 July 2015
Short description: | p@chr12:20551244..20551248, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20551244..20551248, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung carcinoma | 5.87e-09 | 9 |
lung large cell carcinoma | 2.47e-07 | 3 |