FFCP PHASE1:Hg19::chr12:7727871..7727893,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:7727871..7727893,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr12:7727871..7727893,- | |||
|id=chr12:7727871..7727893,- | |||
|ontology_enrichment_celltype=CL:0002619!9.14e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.28e-85;3!CL:0000115;1.83e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.28e-85,3;CL:0000115,7.59e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.02e-17;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-35!115;UBERON:0001049!1.33e-26!57;UBERON:0005068!1.33e-26!57;UBERON:0006241!1.33e-26!57;UBERON:0007135!1.33e-26!57;UBERON:0002616!1.61e-25!59;UBERON:0003080!2.43e-25!42;UBERON:0002780!4.56e-23!41;UBERON:0001890!4.56e-23!41;UBERON:0006240!4.56e-23!41;UBERON:0000955!1.20e-22!69;UBERON:0006238!1.20e-22!69;UBERON:0001017!5.80e-20!82;UBERON:0002020!2.25e-19!34;UBERON:0003528!2.25e-19!34;UBERON:0003075!3.15e-19!86;UBERON:0007284!3.15e-19!86;UBERON:0001893!3.98e-19!34;UBERON:0005743!9.02e-19!86;UBERON:0002346!4.16e-18!90;UBERON:0002791!3.20e-17!33;UBERON:0000073!1.87e-16!94;UBERON:0001016!1.87e-16!94;UBERON:0003056!4.07e-16!61;UBERON:0002298!1.84e-15!8;UBERON:0001869!2.95e-15!32;UBERON:0000200!1.75e-14!6;UBERON:0002308!3.32e-14!9;UBERON:0000125!3.32e-14!9;UBERON:0002771!9.55e-12!3;UBERON:0006331!2.91e-11!3;UBERON:0002619!9.43e-11!22;UBERON:0000153!1.04e-10!129;UBERON:0007811!1.04e-10!129;UBERON:0000033!2.48e-10!123;UBERON:0002420!3.79e-10!9;UBERON:0007245!3.79e-10!9;UBERON:0010009!3.79e-10!9;UBERON:0010011!3.79e-10!9;UBERON:0000454!3.79e-10!9;UBERON:0001950!2.23e-09!20;UBERON:0000956!2.52e-09!25;UBERON:0000203!2.52e-09!25;UBERON:0000062!3.39e-09!511;UBERON:0000007!8.23e-09!2;UBERON:0009663!8.94e-09!7;UBERON:0002950!1.80e-08!2;UBERON:0001891!1.80e-08!2;UBERON:0009616!1.80e-08!2;UBERON:0002148!4.98e-08!2;UBERON:0009662!4.98e-08!2;UBERON:0004121!1.49e-07!169;UBERON:0001871!1.73e-07!7;UBERON:0000924!2.97e-07!173;UBERON:0006601!2.97e-07!173;UBERON:0000025!9.49e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.18e-38;3!UBERON:0000029;3.64e-29;1!UBERON:0004177;1.61e-23;5!UBERON:0005057;1.61e-23;5!UBERON:0000007;2.55e-15;2!UBERON:0002405;4.12e-10;27!UBERON:0003296;2.52e-08;4!UBERON:0010133;2.52e-08;4!UBERON:0002075;2.95e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.18e-38,3;UBERON:0004854,2.18e-38,3;UBERON:0009034,2.18e-38,3;UBERON:0002095,2.18e-38,3;UBERON:0004782,2.18e-38,3;UBERON:0003281,2.18e-38,3;UBERON:0009664,2.18e-38,3;UBERON:0002296,2.18e-38,3;UBERON:0005602,2.18e-38,3;UBERON:0001179,2.18e-38,3;UBERON:0006293,2.18e-38,3;UBERON:0000029,4.20e-29,1;UBERON:0004177,4.02e-17,7;UBERON:0005057,4.02e-17,7;UBERON:0000007,2.37e-15,2;UBERON:0000945,4.07e-15,8;UBERON:0010039,4.07e-15,8;UBERON:0002405,4.26e-11,93;UBERON:0004457,2.03e-10,12;UBERON:0000042,2.03e-10,12;UBERON:0003887,2.03e-10,12;UBERON:0002193,1.35e-09,108;UBERON:0003296,2.43e-08,4;UBERON:0010133,2.43e-08,4;UBERON:0002390,1.70e-07,98;UBERON:0003061,1.70e-07,98;UBERON:0002075,2.95e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49354875295781,4.85840499028469,6.95454032612304,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0.717873024576814,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,0.26446520348538,0,0,0.213574825135389,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,1.59363533945908,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,3.94732455515385,3.6740996144939,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,0,0,0,0.806971285846153,0,0.12729431655633,0.404234377916439,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:7727871..7727893,- | |||
}} |
Latest revision as of 12:31, 24 July 2015
Short description: | p@chr12:7727871..7727893, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7727871..7727893, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.28e-85 | 3 |
endothelial cell | 7.59e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.18e-38 | 3 |
gastrointestinal system mesentery | 2.18e-38 | 3 |
stomach region | 2.18e-38 | 3 |
mesentery | 2.18e-38 | 3 |
gastrointestinal system serosa | 2.18e-38 | 3 |
mesentery of stomach | 2.18e-38 | 3 |
gut mesentery | 2.18e-38 | 3 |
dorsal mesentery | 2.18e-38 | 3 |
dorsal mesogastrium | 2.18e-38 | 3 |
peritoneal cavity | 2.18e-38 | 3 |
spleen primordium | 2.18e-38 | 3 |
lymph node | 4.20e-29 | 1 |
hemopoietic organ | 4.02e-17 | 7 |
immune organ | 4.02e-17 | 7 |
pituitary gland | 2.37e-15 | 2 |
stomach | 4.07e-15 | 8 |
food storage organ | 4.07e-15 | 8 |
immune system | 4.26e-11 | 93 |
cavity lining | 2.03e-10 | 12 |
serous membrane | 2.03e-10 | 12 |
intraembryonic coelom | 2.03e-10 | 12 |
hemolymphoid system | 1.35e-09 | 108 |
gland of diencephalon | 2.43e-08 | 4 |
neuroendocrine gland | 2.43e-08 | 4 |
hematopoietic system | 1.70e-07 | 98 |
blood island | 1.70e-07 | 98 |
viscus | 2.95e-07 | 18 |